Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01921 ATGGCGGCCTTAGGTGAGATTCTCCGGCGTGTATTACCTGAGGAAGTTGCGGAATCCCAACTGGGTTCTGGGCAATTGCATGTTTTAGCAGTAGATGATAGTCATGTGGATCGTAAGGTTATTGAACGTTTGCTAAAAATCTCATCTTGTAAAGTGACAACTGTTGATAGTGGGACAAGAGCGCTTCAGTATCTGGGTTTGGATGGAGAATCGAGCTCTGTTGGCTTTGATAATTTGAAGGTAAATCTGATCATGACGGATTATTCAATGCCGGGGATGACGGGATATGAACTACTGAAGAAGATAAAGGAGTCTACCATTTTTAGGGAGGTACCAGTTGTAATAATGTCTTCTGAGAACATCATGACTCGAATAGACCGATGCTTGGAAGAAGGAGCGGAAGAATTCCTCTTGAAACCTGTGAAACTATCAGATGTGAGACGGTTGAAAAATTTGCTAATGAATTGTGATGGGGCAAAGGAAAGTACAGAGGAAAAAAGCTGGAAGAGAAGTCGATCAGGTGATAATGGTCTTTCGCAGTGCATACCATCGTCCCCACCATCAGCAACACCACCTTCCTGCAAGCGGCCGAGGTTGCATTGA 603 0.4411 MAALGEILRRVLPEEVAESQLGSGQLHVLAVDDSHVDRKVIERLLKISSCKVTTVDSGTRALQYLGLDGESSSVGFDNLKVNLIMTDYSMPGMTGYELLKKIKESTIFREVPVVIMSSENIMTRIDRCLEEGAEEFLLKPVKLSDVRRLKNLLMNCDGAKESTEEKSWKRSRSGDNGLSQCIPSSPPSATPPSCKRPRLH* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01921 200 SUPERFAMILY CheY-like 25 151 IPR011006 -
Pte1g01921 200 SMART REC_2 26 153 IPR001789 GO:0000160
Pte1g01921 200 CDD REC_typeA_ARR 28 149 - -
Pte1g01921 200 Gene3D - 25 180 - -
Pte1g01921 200 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Pte1g01921 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 167 IPR045279 GO:0009736
Pte1g01921 200 MobiDBLite consensus disorder prediction 162 200 - -
Pte1g01921 200 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01921 Pte-Chr1 40404521 40407080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01921 19 157 Response Regulator Gene Family AT5G62920 80.714 1.45e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g01921 Response_reg 4.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01921 K14492 - rcu:8258131 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01921 1 40404521 40407080 Pte1g01921 1 40404521 40407080 RCT