Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01912 ATGACTCTGAAGGGTGGCAGAAGCCAGGCTTGTGCTGCATGCAAATACCAAAGGAGGAAATGTTCTCCCGAGTGTCCTCTTGCTCCATACTTCCCAGCAGACGAACCAAAAAAGTTCGACAACGTACATAAATTATTTGGAGTGAAAAAAATTCAAAGATTGCTGGAGAGCCTGAACCCCAATCAGAGGAATGAAGCAATGGTGGCCATAATTTATCAAGCCGATATAAGAGATAAGTTTCCTGTTCATGGCTGCTGGGAAGTCATTCGTCGTTTGAATTACCTAATATGTCAGGTCGAAGAAGAACTTTATGCTGTCAATGCACAGATTAAGATGTACCGACAACGTGAACAACAAGTACCTCAGCCTCATGCTTGTTCGATTTCCGTCACTGATGATGTCACTTCACATCCATTCATCGTTGACGCAGCTGCTTTACCTGTTCTACAACACCATTCTTACTCCAATATCTTCACCAGTCCTTCAATGTTTCAGCGGCGACTATACGTTAACAACAATGACAACTCTCCTTACAGGATACAAGTACATCCCTGTTTTGATGCAATTAGTGATAGACAATTGTGTATTGAAACAAAAAAGGCTCACAAATCAAGAACGACACCAATGGAATACATACAAGAGTCGAACTTCATAGGTGCTAACACGAGCACCATGTAG 678 0.4204 MTLKGGRSQACAACKYQRRKCSPECPLAPYFPADEPKKFDNVHKLFGVKKIQRLLESLNPNQRNEAMVAIIYQADIRDKFPVHGCWEVIRRLNYLICQVEEELYAVNAQIKMYRQREQQVPQPHACSISVTDDVTSHPFIVDAAALPVLQHHSYSNIFTSPSMFQRRLYVNNNDNSPYRIQVHPCFDAISDRQLCIETKKAHKSRTTPMEYIQESNFIGANTSTM* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01912 225 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Pte1g01912 225 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Pte1g01912 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01912 Pte-Chr1 40323966 40325145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01912 1 114 AS2 family AT3G47870 60.526 1.32e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte1g01912 LOB 7.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01912 - - peu:105128634 200.29