Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01902 ATGTACGGATTCATCGTTTCCCGAGGGATGGGAGCTAAGGCTCCGCAGAGGGCTCTGAACTGGTTCTACACCATAAACCAATCAAGAGCTGTTGGATCACTATCCTTTGCAACTCTTGATGCAGAAGAGCTATCAGGTTCTCATCCTGCGGAAGTTCATAACTTGGTGCAAGGTCAATGGGCTGGATCTTCTAACTGGAATACTATTGTGGATCCTTTAAATGGTGAACCATTTATAAAAGTTGCTGATGTCGATGAAAAGGGAATACAGCCGTTCGTCGAAAGCTTGTCCAAATGTCCTAAACATGGTCTTCACAACCCCTTTAAAGCACCAGACAGGTATGTACTGAATAGGTTCTTCATTGGTTTTAGTTCTTGGCCGGTTCAAGTTAATCTCTTCTGGAAGATATTTAGCCAGTTTATGCAGGGGCCCATATGGGAACTTTTCTGTGAACATATGGAAGTTCCTAATGAATATCTTTTATATGGTGATATATCTACCAAGGCAGCACACATGCTTTCACTTCCAAAGGTATCGGATTTCTTCACAAGGCTAATACAAAGGGTTTCACCAAAGAGTTATCAGCAGGCATATGGTGAAGTTTTTGTCACACGCAAGTTTCTAGAAAATTTCTGTGGTGATCAGGTGCGATTCCTGGCAAGGTCCTTTGCGGTTCCTGGAAATCACCTTGGACAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCGGTGGCAATCATTACTCCTTTCAATTTTCCTTTGGAAATTCCAGTACTTCAGTTGATGGGTGCACTATATATGGGAAATAAACCGCTTCTTAAAGTTGACAGCAAGGTGAGCATTGTTATGGATCAAATGTTGCGGCTGCTTCATGAATGCGGGCTACCTGCTGAAGATGTGGACTTCATAAATTCTGATGGAAAGGCAATGAACAAGCTACTGCTGGAGGCAAATCCACGCATGACTCTTTTCACTGGAAGCTCAAGGGTAGCAGAGAAGTTGGCTCTTGATTTAAAGGGTCGTATAAAACTAGAAGATGCTGGGTTTGACTGGAAAGTCCTGGGTCCAGATGCTCATGAGGAGGACTATGTAGCATGGGTATGTGACCAGGATGCATATGCATGCAGCGGTCAGAAGTGCTCAGCACAATCTTTGTTATTTATGCATGAGAACTGGTCCAGTACTTCATTGATATCCAAATTGAAAGAGCTTGCTGAGAGAAGGAAGCTTGAGGACCTCACAATAGGGCCTGTGTTAACTTTCACTACGAGCTCGATATTGGATCATATGAATCAATTACTTCAGATACCAGGTGCCAAACTACTCTTCGGGGGTGAACCTTTACAAAATCATTCGATTCCGCAGGTGTATGGAGCTATACAGCCGACGGCCATTTTTGTTCCCCTTGAAGAAATGTTGAAGGATAAACATTACGATCTTGTAACAAGAGAAATATTTGGACCATTCCAGATCATTACCGAATACAGAGAAGATCAATTGCCAATGGTGTTGGATGCGTTAGAAAGAATGCATGCTCATTTAACTGCTGCTGTTGTTTCAAATGATCCTATCTTCGTGCAGAAAATCATAGGAAATACAGTTAATGGAACTACCTACGCTGGTTTGAGAGCAAGGACAACTGGAGCTCCACAAAATCATTGGTTTGGACCAGCTGGTGATCCTAGAGGTGCAGGAATAGGAACCCCAGAAGCTATAAAGCTCGTTTGGTCATGTCACAGAGAAGTAATTTATGATGTGGGGCCCGTGCCAAGCGACTGGAAACTCCCACCATCAACATGA 1800 0.4328 MYGFIVSRGMGAKAPQRALNWFYTINQSRAVGSLSFATLDAEELSGSHPAEVHNLVQGQWAGSSNWNTIVDPLNGEPFIKVADVDEKGIQPFVESLSKCPKHGLHNPFKAPDRYVLNRFFIGFSSWPVQVNLFWKIFSQFMQGPIWELFCEHMEVPNEYLLYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAYGEVFVTRKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVSIVMDQMLRLLHECGLPAEDVDFINSDGKAMNKLLLEANPRMTLFTGSSRVAEKLALDLKGRIKLEDAGFDWKVLGPDAHEEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWSSTSLISKLKELAERRKLEDLTIGPVLTFTTSSILDHMNQLLQIPGAKLLFGGEPLQNHSIPQVYGAIQPTAIFVPLEEMLKDKHYDLVTREIFGPFQIITEYREDQLPMVLDALERMHAHLTAAVVSNDPIFVQKIIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDVGPVPSDWKLPPST* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01902 599 SUPERFAMILY ALDH-like 177 567 IPR016161 GO:0016491
Pte1g01902 599 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 373 384 IPR016160 GO:0016491
Pte1g01902 599 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 344 IPR016162 GO:0016491
Pte1g01902 599 FunFam probable aldehyde dehydrogenase 135 348 - -
Pte1g01902 599 Pfam Aldehyde dehydrogenase family 179 541 IPR015590 GO:0016491
Pte1g01902 599 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 32 599 IPR044638 GO:0004029
Pte1g01902 599 FunFam Aldehyde dehydrogenase 12 356 544 - -
Pte1g01902 599 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 353 542 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01902 Pte-Chr1 40273017 40279339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01902 1 600 Aldehyde Dehydrogenase Gene Family AT5G62530 75.083 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01902 K00294 - qsa:O6P43_022809 964.911