Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01901 ATGGAGGTCGCTATGATCAGAAGAGTCGGCCATAAAGGTGGGGCGATTGATCTAGAGCATAGAGGCGGCGTTGGTGCAGAGATTGTTGCCGAGGTGCCACGAGTTGCTTACATGGAGAAATCCATGGTTGAGACAAGACCTTCTTCTTCAACACGGAAAGAAGAGGTTGATGAGCTTGAATCTGCGAAGGCCGAAATGGATGAGGTCAGCGAAGAAAATCAAAGATTAAAGATGTTTCTGGATAAAATTATGAAGGATTATCGGACACTCCAGATGCAATTCCAAGAAATAGTTCGAAAGGAACCAAAAGGAACAAGTGAGGATAATACGCGCAATGGTCATGAAGAAATTGAAGAATCTGAGCTGGTTTCTCTTAGCCTTGGCAGAAGTTCCGGGGATCCAAAAAAAGTTGCAGTGAAGAAACTTTCTAAACTTTGCAAAGAAGAAAAGGATCAGGACTTGGTTCTTGGATTGAATTTCAAGACTGAAACATCAAAATCAGGGGGAAGCACAGCAGAACGTTTGCCAAATACTTCAAGCACAAGCAACAGTTCTGAAGTACCAAAAGAAGATGCTGAGGATACTTGGCTACCCAGCAAAGTACTAAAGACGATGAGAAGCACCGGAGACGATGAAGTTTCACAGCAGAATCCAGCTAAAAAGGCTAGGGTTTGTGTTAGAGCAAGATGTGACACTCCAACGATGAATGATGGATGTCAGTGGAGGAAGTATGGACAAAAAATTGCCAAAGGAAATCCTTGTCCTAGGGCTTACTATCGTTGCACAATAGCGTCATCTTGCCCAGTGAGAAAGCAGGTGCAAAGATGCGCAGAAGACATGTCCATTTTGACCACAACATATGAAGGAAAGCACAACCACCCTCTATCTATTTCAGCCACTGTTATGGCTTCCACTACTTCTGCCGCTGCTTCCATGCTTCTGTCTGGCTCATCAATCTCCCAACCTAACTTCTTTCCCGGCCATACTACACCTGCTTCAGCTGTGCATGGTGCAAACTTTTATCTATCCCATGGTGCAAATCCGAAGCCTTATTACTTGTCCAACACGTCAGTGTCATCCTCATCTTCTTTCCCCACCATCACTCTTGACCTAACTTCTACTCCATCCTCCTCCTCATCACAATTCAATAGATTTTCTGGCTCATCCCTCGTCAATTCTCCAATATATTCCTCCGCCAGCCTCAACTTCAATAACAATGCAGAAGCCAATACAATTTCTCTGAGTAACGGATTACTTGGCTATGGCAATACTCATTCCTCCAGCAGCAACGGTGCATTGTCGGCGATCCACATTGGTGGGCAGTCAGTAGAAAATATGTACAGTCCTTATATGCACAAAGCCAATGCAAGTTTTCAGCAACATTCTCTGTACCCAGATGCTATAACTGCAGCAACGAAAGCAATCACATCTGATCCCAGTTTTCAGTCAGCCCTAGCAGTTGCACTCTCTTCAATGATTGATGCTGGAGGTAGTAAGGGTAGCATTAACCTTGAAAATCAAATTAGTGGAGAAAACATTTCTCAGAATTTGAAATGGAGAGAGCTCTTCCCTGCTGCTTCAACTTTGCCATCGACATCAAAAGTAAACGGGTGTGCATCGACCTTATTAAATAAACCGTCATCGAAAAATCCACAGCCGGGAAGTTTGATGTTTTTACCACCACAGTCGTCGTTGTCGATGCCTTTTGCTAGTTCCAATGGTGCATCTGCATCGACAAATTGCGATAATAGAGACGGTGCCAATTGA 1767 0.4397 MEVAMIRRVGHKGGAIDLEHRGGVGAEIVAEVPRVAYMEKSMVETRPSSSTRKEEVDELESAKAEMDEVSEENQRLKMFLDKIMKDYRTLQMQFQEIVRKEPKGTSEDNTRNGHEEIEESELVSLSLGRSSGDPKKVAVKKLSKLCKEEKDQDLVLGLNFKTETSKSGGSTAERLPNTSSTSNSSEVPKEDAEDTWLPSKVLKTMRSTGDDEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIASSCPVRKQVQRCAEDMSILTTTYEGKHNHPLSISATVMASTTSAAASMLLSGSSISQPNFFPGHTTPASAVHGANFYLSHGANPKPYYLSNTSVSSSSSFPTITLDLTSTPSSSSSQFNRFSGSSLVNSPIYSSASLNFNNNAEANTISLSNGLLGYGNTHSSSSNGALSAIHIGGQSVENMYSPYMHKANASFQQHSLYPDAITAATKAITSDPSFQSALAVALSSMIDAGGSKGSINLENQISGENISQNLKWRELFPAASTLPSTSKVNGCASTLLNKPSSKNPQPGSLMFLPPQSSLSMPFASSNGASASTNCDNRDGAN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01901 588 Coils Coil 52 79 - -
Pte1g01901 588 MobiDBLite consensus disorder prediction 540 588 - -
Pte1g01901 588 SMART WRKY_cls 235 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g01901 588 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 497 IPR044810 GO:0003700
Pte1g01901 588 MobiDBLite consensus disorder prediction 162 186 - -
Pte1g01901 588 MobiDBLite consensus disorder prediction 100 134 - -
Pte1g01901 588 MobiDBLite consensus disorder prediction 162 197 - -
Pte1g01901 588 FunFam probable WRKY transcription factor 31 220 297 - -
Pte1g01901 588 SUPERFAMILY WRKY DNA-binding domain 228 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g01901 588 ProSiteProfiles WRKY domain profile. 230 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g01901 588 MobiDBLite consensus disorder prediction 100 122 - -
Pte1g01901 588 Gene3D WRKY domain 219 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g01901 588 Pfam WRKY DNA -binding domain 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01901 Pte-Chr1 40264504 40267715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01901 58 493 WRKY Transcription Factor Family AT1G18860 42.742 2.64e-78 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g01901 WRKY 7.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01901 - - cill:122280579 487.263