Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01898 ATGGGAAAGTCACCTGGAAAATGGATCAAAACTGTGCTATTTGGGAAGAGGTCATCAAAATCCAACCCCATGAAAGCAAGAGAGAATTTTGGAACTGGTAATGAAGCATTGGCCAATAAGGCATCTCATACGAACTTGGTTCCAGATCTTCCTGTAGCTTCACATAAATTTGAAGCTACTCTGAGCAACAACGAAACGGGGGTGGAAGTGGATAATAAAGAAAATGAAAATGTATTGTATGAGAGGGAAATATCTTTCCAAAGGAATCAGGGAACAGAGACAGAAGAATTAATCCCTGAAAACTCGCTTGCCGACCAGGAGAACATGATACTGGAGCAAGCTGCTACCAAGGCACAGGCAGCTTTTAGGGGTTATTTGGCTCGGCGTGCATTTTGGGCTCTAAAGGGCATTATAAGACTGCAGGCTCTTATCCGTGGGCACTTGGTAAGGAGACAAGCTGTTGCTACTTTCTGCTGTATGTATGGGATCGTCAAGTTTCAGGCTCTTGTTCGTGGAAAAAGCATTAGGTATTGCAGTATTGGATCTATAAATTGCGGTGCACCTAAGCCTCTGGATGAAAATCTTGTCAAGCCAGGTGCAATTGATATATACACCAAAGTGACAAGGATGTCGGAAAATACCTTCATTCGCAAGCTTGTTGGATCACCACCAAAAGCTATGCCTCTGCATATCCAGTACGATCATGCTGAGCCAAACTCAGTCCCAAGTTGGTTGGAACGCTGGTCAATGTCTCACTTCTGGAAACCAGTTCCCCAGCCCAAGAAAGTTTCAGACTCTAAGTCTCAGAAAAAGCAAAGTAACACTTCGACTCTGGAATCTCAAACAGGAAAGTCCAAGCGCAGCATTCGGAAGATACCTATTATAAACCCCGATACTGCCTCAGCACAAATGACCTCTGAATTGGATAAACCAAAAAGAAGTGTCCGGAAAGCTTCGAGCCAGATTACCCAGATTACAGATTCTGCAGTAGAAAATCCACAAATTGAACTTGAAAAGATCAAGCGTAACCTAAGAAAGGTTCATAACCCAGTTGTGGAGAATACTGTTCAGTCTGAAGTAGAAACTGAGACTCCGAAACAAAGTATAGAAAAGACACTTGTAACTTTGGGCTATGACGTTCCAAAACAGGTTGCATGTGATTCTAATGGGACTATCAATAAGGGGGCAGCTAGCATAGTGTCCAATGTCCCTGATGTACAAGCAGAAACTTTGGTGTGGAAAGATGCATCTGATATACCACCTAACAATCAAGGCTTGGTTGATTCAGGGCTTTCAGTAGATTGCACTACTAAAGACGAAAACCTTACTGATGAGCAAGCATTGGACCTGGCAAATTATCTGACTGACAGCAGCTCTAAACACGAGAACAATGTGACAGAAAATGGGGAATTAGGTTATAAGGAGAACAATGTAGGTAATGATGCACAGAAGTCTGGTCGTAGAACTTCTACTCCTGTAAAGCTTGAACGAGCTGAAAGTGGTTCCCAGAATAATCCAACTTTACCAAGTTATATGGCGGCAACCGAATCTGCAAAGGCAAAGCTGAGAGCTCAAGGCTCCCCTAGGTTCGGTCAAGAAAGTTCTGAGAGAAACAACGTCACTAGACGCCATTCTCTGCCTTCAGCTAACAGCAAAATCAGTTCTCATTCACCAAGGACACAGAGACCAGTACAAGCAGGCAGCAAAGGAGGGAGCAGAACTGACCGATCTTCCAAAGACACAAATGGAAGGGTAGCTCAAGTCGAGTGGAAAAGGTAA 1779 0.4356 MGKSPGKWIKTVLFGKRSSKSNPMKARENFGTGNEALANKASHTNLVPDLPVASHKFEATLSNNETGVEVDNKENENVLYEREISFQRNQGTETEELIPENSLADQENMILEQAATKAQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATFCCMYGIVKFQALVRGKSIRYCSIGSINCGAPKPLDENLVKPGAIDIYTKVTRMSENTFIRKLVGSPPKAMPLHIQYDHAEPNSVPSWLERWSMSHFWKPVPQPKKVSDSKSQKKQSNTSTLESQTGKSKRSIRKIPIINPDTASAQMTSELDKPKRSVRKASSQITQITDSAVENPQIELEKIKRNLRKVHNPVVENTVQSEVETETPKQSIEKTLVTLGYDVPKQVACDSNGTINKGAASIVSNVPDVQAETLVWKDASDIPPNNQGLVDSGLSVDCTTKDENLTDEQALDLANYLTDSSSKHENNVTENGELGYKENNVGNDAQKSGRRTSTPVKLERAESGSQNNPTLPSYMAATESAKAKLRAQGSPRFGQESSERNNVTRRHSLPSANSKISSHSPRTQRPVQAGSKGGSRTDRSSKDTNGRVAQVEWKR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01898 592 SMART iq_5 110 132 IPR000048 GO:0005515
Pte1g01898 592 SMART iq_5 133 154 IPR000048 GO:0005515
Pte1g01898 592 MobiDBLite consensus disorder prediction 257 317 - -
Pte1g01898 592 MobiDBLite consensus disorder prediction 458 592 - -
Pte1g01898 592 MobiDBLite consensus disorder prediction 528 572 - -
Pte1g01898 592 PANTHER IQ-DOMAIN 5-RELATED 1 554 - -
Pte1g01898 592 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Pte1g01898 592 MobiDBLite consensus disorder prediction 269 283 - -
Pte1g01898 592 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Pte1g01898 592 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Pte1g01898 592 Pfam Protein of unknown function (DUF4005) 491 572 IPR025064 -
Pte1g01898 592 MobiDBLite consensus disorder prediction 458 512 - -
Pte1g01898 592 Gene3D - 110 157 - -
Pte1g01898 592 ProSiteProfiles IQ motif profile. 135 157 IPR000048 GO:0005515
Pte1g01898 592 Coils Coil 70 90 - -
Pte1g01898 592 MobiDBLite consensus disorder prediction 573 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01898 Pte-Chr1 40238020 40243286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01898 1 593 IQD Protein Family AT1G74690 41.262 6.47e-123 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01898 - - qsu:111988548 568.54