Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01881 ATGGATGGGAACAAGGACGATGCTTTGAAATGCTTGAAGATCGGGAAAGAAGCGTTGAAAGCTGGTGATCGAGCAAGATCTCTCAAGTTTGTGAATAAAGCACGTCGTCTCGATCCGACTTTACATGTTGATGATTTAATTGCCACGATACAGTGTGAAATGGATCAGGGGTCTGGTCAGGATTCAGGCAAGGATTTGGGATCTAATACTGATGCCAAAACTGCCAATGGACCGTCTGGGTCCTCGTCAGCTAAGTCAACCGATCCACCCTCGCTTCGCCAGAGGATTTCTTCAACTGGGTCGTCGTCGGCTTCATCAACGGCTGCGACTTATACGGAGGAACAGATTACTTTGGTGAGGGAAATAAAGAGGAAGAAGAATTATTATGAGATTTTGGGATTGGAGAAGAGTTGTACTGTTGAGGATGTGCGAAAAGCGTATAGGAAATTGTCTTTGAAGGTTCATCCTGATAAGAACACAGCTCCTGGTGCTGAAGAAGCGTTCAAGGTAGTGTCTAGAGCATTTCAGTGTCTTAGTAATGAAGAAAGTAGGAAAAAGTATGATCTTGTTGGATCAGACGAACCCGTGTATGAGAGGCGTCCTACAAGGCATGGTGCACATGGATGTAATGGATACTACGATTCGGAATTTGATGCTGAAGAAATATTTAGGAATTTCTTCTATGGTGGGATGGGTCCGATGCAAGCTAATTTTAGCGGTTTCAATTTTGGGCCAAGAATGGCACAGAGGACCGCTGATCATGGTTCTGCTGGATTTAATATAAGAGCTTTGATTCAGATCTTACCTGTTCTGCTTATCCTACTGTTGAACTTCTTACCATCTTCAGAACCCGTTTACTCTCTATCGCGGACTTATCCATATGAACACAGGTTTACTACGCAGAGGGGTGTCAATTACTATGTTAAGTCGGCCAAGTTTGAACAAGATTATCCATCAAATAGCCATGAACGACAGACACTAGAAGGGAAAATTGAGAGGGAATACTTCAACATTCTTGCTCAGAATTGTAGGCTTGAGTTGCAGCGTCGGCAGTGGGGATTTATCAGGGAAACACCACATTGTGACATGCTACAGCAGTTTGAATCAGTAGCTTGA 1116 0.4364 MDGNKDDALKCLKIGKEALKAGDRARSLKFVNKARRLDPTLHVDDLIATIQCEMDQGSGQDSGKDLGSNTDAKTANGPSGSSSAKSTDPPSLRQRISSTGSSSASSTAATYTEEQITLVREIKRKKNYYEILGLEKSCTVEDVRKAYRKLSLKVHPDKNTAPGAEEAFKVVSRAFQCLSNEESRKKYDLVGSDEPVYERRPTRHGAHGCNGYYDSEFDAEEIFRNFFYGGMGPMQANFSGFNFGPRMAQRTADHGSAGFNIRALIQILPVLLILLLNFLPSSEPVYSLSRTYPYEHRFTTQRGVNYYVKSAKFEQDYPSNSHERQTLEGKIEREYFNILAQNCRLELQRRQWGFIRETPHCDMLQQFESVA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01881 371 PRINTS DnaJ domain signature 129 147 IPR001623 -
Pte1g01881 371 PRINTS DnaJ domain signature 163 183 IPR001623 -
Pte1g01881 371 PRINTS DnaJ domain signature 147 162 IPR001623 -
Pte1g01881 371 MobiDBLite consensus disorder prediction 56 110 - -
Pte1g01881 371 ProSitePatterns Nt-dnaJ domain signature. 168 187 IPR018253 -
Pte1g01881 371 PANTHER AT29763P-RELATED 1 366 - -
Pte1g01881 371 ProSiteProfiles dnaJ domain profile. 127 191 IPR001623 -
Pte1g01881 371 FunFam Chaperone protein dnaJ 49 123 239 - -
Pte1g01881 371 Pfam DnaJ domain 127 188 IPR001623 -
Pte1g01881 371 SMART dnaj_3 126 183 IPR001623 -
Pte1g01881 371 CDD DnaJ 127 180 IPR001623 -
Pte1g01881 371 Gene3D DnaJ domain 123 239 IPR036869 -
Pte1g01881 371 Pfam Domain of unknown function (DUF1977) 280 351 IPR015399 -
Pte1g01881 371 SUPERFAMILY Chaperone J-domain 123 236 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01881 Pte-Chr1 40022040 40023155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01881 122 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.84e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01881 K09518 - qsa:O6P43_023079 531.561