Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01862 ATGGTGGTAGGCCAAACATTCGACGAAGTTGTTGGAAGTCCTTATTACATGGCTCCAGAGGTCTTGAGACGAAACTATGGACAACAAGTTGATATTTGGAGTGCTGGTGTTATTCTTTACATACTACTCTGTGGGGTTCCTCCATTTTGGGCAGAAACTGAGGGAGGAATTGCACAGGCCATTATCAGAGGAGAACTAGATTTTGAAAGAGATCCCTGGCCAAAGATTTCAGAAAGTGCAAAAGATCTAGTTAGGAGTATGCTTGATCCAAATCCCTATACACGACTCACAGTTAAAGAAGTTCTTGAACATCCATGGATAAAAAATAGAGACAAGATTCGTAATGTTTCACTTGGAGATAATGTTCGACAACGGATCAAGCAGTTTTACTTGATGAACAAGTTCAAGAAGAAAGTTCTCACAGTGGTGGTAGACATGTTACCAGAGGAGCAAATAGATATGCTGAGGGAGACCTTTAATATGATGGACAGTGACCGTAATGGACACCTAACATTGCAAGAGCTCAAAGATGGGCTATCTAAGTTTGGGCATCCTATTCCAGATCATGATGTGAAGATGTTGATGGAAGCTGCTGATGCTGATGGAACTGGCACACTAGACTGTGAAGAATTTTTGGCAATATCCCTCCACTTGGAAAGAATTGCTTGCGATGACTACCTCTCTCAAGCTTTCGCTTACTTTGACAAGAACCGGACTGGGTATATTGAATTCGAAGAATTGAGGGAAGCCTTGTTGGATGACAACCCTGGTTCTAACAATGACAAGGCGATTCGTGAAATCATGTTTGACGTGGATTTGAACAAGGATGGTCGGATCAGTTATGAAGAGTTTAAAGCAATGATGAAGACAGGAATGGATTGGAAAATGTCTTCTCGCCAGTATTCTAGAGCAATGCTGAGTGAACTTAGCTTGAGACTGTTCAGCAACAAATTTTCCAGAAAATTAATCGTTACGTAA 978 0.4121 MVVGQTFDEVVGSPYYMAPEVLRRNYGQQVDIWSAGVILYILLCGVPPFWAETEGGIAQAIIRGELDFERDPWPKISESAKDLVRSMLDPNPYTRLTVKEVLEHPWIKNRDKIRNVSLGDNVRQRIKQFYLMNKFKKKVLTVVVDMLPEEQIDMLRETFNMMDSDRNGHLTLQELKDGLSKFGHPIPDHDVKMLMEAADADGTGTLDCEEFLAISLHLERIACDDYLSQAFAYFDKNRTGYIEFEELREALLDDNPGSNNDKAIREIMFDVDLNKDGRISYEEFKAMMKTGMDWKMSSRQYSRAMLSELSLRLFSNKFSRKLIVT* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01862 325 ProSitePatterns EF-hand calcium-binding domain. 272 284 IPR018247 -
Pte1g01862 325 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Pte1g01862 325 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 284 - -
Pte1g01862 325 SUPERFAMILY Protein kinase-like (PK-like) 6 123 IPR011009 -
Pte1g01862 325 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
Pte1g01862 325 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Pte1g01862 325 Gene3D Transferase(Phosphotransferase) domain 1 3 115 - -
Pte1g01862 325 FunFam Calcium-dependent protein kinase 7 116 292 - -
Pte1g01862 325 SUPERFAMILY EF-hand 146 288 IPR011992 -
Pte1g01862 325 SMART serkin_6 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01862 325 ProSiteProfiles EF-hand calcium-binding domain profile. 150 185 IPR002048 GO:0005509
Pte1g01862 325 ProSiteProfiles EF-hand calcium-binding domain profile. 259 294 IPR002048 GO:0005509
Pte1g01862 325 ProSitePatterns EF-hand calcium-binding domain. 235 247 IPR018247 -
Pte1g01862 325 Pfam EF-hand domain pair 155 214 IPR002048 GO:0005509
Pte1g01862 325 Pfam EF-hand domain pair 227 289 IPR002048 GO:0005509
Pte1g01862 325 FunFam Calcium-dependent protein kinase SK5 17 112 - -
Pte1g01862 325 Gene3D - 116 292 - -
Pte1g01862 325 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01862 325 ProSiteProfiles EF-hand calcium-binding domain profile. 222 257 IPR002048 GO:0005509
Pte1g01862 325 SMART efh_1 226 254 IPR002048 GO:0005509
Pte1g01862 325 SMART efh_1 263 291 IPR002048 GO:0005509
Pte1g01862 325 SMART efh_1 154 182 IPR002048 GO:0005509
Pte1g01862 325 SMART efh_1 190 218 IPR002048 GO:0005509
Pte1g01862 325 Pfam Protein kinase domain 5 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01862 Pte-Chr1 39903732 39905489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01862 4 319 EF-hand Containing Proteins AT2G31500 65.094 2.38e-161 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte1g01862 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01862 K13412 - zju:107435963 485.723