Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01852 ATGGAACCAGCTCCAGCGCCAACGTTGCACTTGCCGGAGCGCCTTGACCTGGACAACCTTATACCCTTGAAAGTCCTAGGTAGAGGAGCCATGGGGACCGTCTTTCTCGTACACGACCGCTTGGCAGACCCCACAGTTCGCAATCCATTTGCTCTCAAGGTCGTTGAGAAATCGTCCCTGCACACTAAGCTTGATGCTGACCGCCGAGCCCGCTGGGAAATTCAAGTTCTCACCTGCCTTTCTCATCCTAATACCCACCCATTTCTACCATCCCTTCTTGGGTCATCGGAGTCGGAACTTTTCTTAGCCTGGGCTGTGCCTTACTGTTCAGGTGGCGACCTCAATGTTCTCCGTTATCATCAAACGGACCGTGTCTTCTCCCCCGCCGCTATTCGCTTTTACTTGGCTGAGATTGTCTGCGCTCTCGAGCACCTTCACGACATGGGCATTGCTTACCGTGATTTGAAGCCTGAGAATGTTCTAATTCAGCAATCAGGTCACGTGACTCTCACAGACTTTGACCTCTCTAGGAAACTCATGCCCAAGTCCATCCAAACCGCCCTTTACGAAGAGAAGCTCGCTGATACACGACGGGAGCATCGCCGGAAGCTCCCACGGTGGATGCCAGACACTGGAAATATAAAAAGTGGTTCGAAGAAAGCCAAGTCTGCCCGCGTCAGCCCGATGAATAGACGCAACCCAAGCTTCTCCAACGGAGAAAGGTCCAACTCGTTCGTCGGAACTGAGGAGTATGTGGCACCGGAAGTTGTGCGCGGTGACGGGCATGAATTCGCCGTAGATTGGTGGGCTCTGGGAATCCTAAGTTACGAGATGTTATACGGTACGACACCGTTTAAAGGGATGAACCGAAAGGAAACGTTTCGGAACGTGTTGTTCAAGAGCCCGGAGTTTATGGGAAAAAGAACAGCGTTAACGGATCTTATACAAAAGCTCTTAGAGAAGAATCCAACAAAACGATTGGGATATTTGAAAGGCGCGAGTGAGATCAAGGAGCACGAGTTCTTCAGCGGAGTCAGGTGGGACCTACTGACAGATGTAGATCGGCCGCCTTTTATCCCGTCGAGGGAGGACGGAGATTGGACGGAGCAGCAGAGATCCGGTGGGGGGAGTGTAAGAGACTACTTTGAGAGCTTGAAATCACCTCTGTCTTTACCAACCTCTCCACTGCCGTCGCCGTCATCTGAATATCAGCGAAACGTTTCTCTAACGGAATTCTGA 1239 0.5157 MEPAPAPTLHLPERLDLDNLIPLKVLGRGAMGTVFLVHDRLADPTVRNPFALKVVEKSSLHTKLDADRRARWEIQVLTCLSHPNTHPFLPSLLGSSESELFLAWAVPYCSGGDLNVLRYHQTDRVFSPAAIRFYLAEIVCALEHLHDMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLMPKSIQTALYEEKLADTRREHRRKLPRWMPDTGNIKSGSKKAKSARVSPMNRRNPSFSNGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGMNRKETFRNVLFKSPEFMGKRTALTDLIQKLLEKNPTKRLGYLKGASEIKEHEFFSGVRWDLLTDVDRPPFIPSREDGDWTEQQRSGGGSVRDYFESLKSPLSLPTSPLPSPSSEYQRNVSLTEF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01852 412 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Pte1g01852 412 ProSiteProfiles Protein kinase domain profile. 20 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01852 412 Gene3D Transferase(Phosphotransferase) domain 1 240 361 - -
Pte1g01852 412 MobiDBLite consensus disorder prediction 387 412 - -
Pte1g01852 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Pte1g01852 412 SUPERFAMILY Protein kinase-like (PK-like) 18 398 IPR011009 -
Pte1g01852 412 SMART serkin_6 20 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01852 412 MobiDBLite consensus disorder prediction 360 412 - -
Pte1g01852 412 FunFam Serine/threonine-protein kinase OXI1 113 181 - -
Pte1g01852 412 FunFam Serine/threonine-protein kinase OXI1 240 361 - -
Pte1g01852 412 PANTHER FLIPPASE KINASE 1-RELATED 14 363 - -
Pte1g01852 412 Gene3D Phosphorylase Kinase; domain 1 22 108 - -
Pte1g01852 412 Gene3D Transferase(Phosphotransferase) domain 1 109 183 - -
Pte1g01852 412 FunFam Serine/threonine-protein kinase UCNL 20 112 - -
Pte1g01852 412 Pfam Protein kinase domain 24 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01852 412 Pfam Protein kinase domain 237 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01852 412 MobiDBLite consensus disorder prediction 207 242 - -
Pte1g01852 412 MobiDBLite consensus disorder prediction 228 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01852 Pte-Chr1 39811643 39813294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01852 13 413 AGC Kinase Gene Family AT3G20830 60.688 6.35e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte1g01852 Pkinase 1.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01852 - K08286 qsa:O6P43_028132 599.356