Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01851 ATGAATATCCCGGCAGACAGCGAAGTTCCAAAAGTTGCTGATTTTCTTGGTGTGAGCAAGTCTGAGCATCGGTCAGATCTTGTAGCCTTCAATGAAATCCAGTCCAATGATTCAGATTACTTATTCTCAAATACCGGTATGGTACCGGTTCAGAACTCATCATCAGTCGCTACATCTGGCAGCTTCGAGTTTCAAGAAACAGCTAGCAGTAATATTCAGTCTTTGACCTTGTCAATGGGTAGTGGCAAAGTTTCAGCAAGTGAAACCAGTGGCGATAACAGTACAACCTTGAGCGTTGTTGAAACTGCGCCAAAAAGGACCTCGGATACCTTCGGCCAAAGGACATCTATATATCGTGGTGTCACAAGACATAGATGGACTGGTAGGTATGAGGCTCACCTTTGGGACAATAGTTGTAGAAGAGAAGGGCAATCGAGAAAAGGACGACAAGGTGGCTATGACAAGGAGGACAAAGCTGCTAAGGCTTATGATCTTGCTGCTCTAAAGTATTGGGGACCATCAACTACTACCAACTTTCAAGTTAGTAACTATGAAAAGGAATTGGAGGAAATGAAGCATATGACTAGACAAGAATTTGTGGCCGCCATAAGAAGGAAGAGTAGTGGGTTTTCTAGAGGTGCTTCTATGTATCGCGGAGTGACAAGGCATCACCAACATGGAAGATGGCAAGCGCGGATTGGCAGAGTTGCAGGAAACAAAGATCTTTATTTGGGGACTTTCAGTACTGAAGAAGAAGCTGCAGAAGCTTATGACATAGCTGCAATAAAATTTAGAGGCTTAAGCGCTGTGACTAACTTTGACATGAATCGCTATGATGTTAAGAGCATCCTTGAAAGTAACACTCTCCCTATTGGGGGAGGAACAGCTAAAAGACTAAAGGAGGCTCGAGCCCTCGACTCTTCTAGGAAACGTGAAGAGATGATTGCTCTAGGTTCAAGCTTCCCCTACGGAAGCTCAAGCTCTAGCAGACTACAAGGATATTCTTTGATGCAACATCAATTTGATCAGCCCCAGCCTGTGCTTAGCCTACATAGTCAGGAGATTACACCATATTCTCACGATCCTTCGTTTCATCAAAGTAACTACATTCAAACCCAGCCGCAACTGCACCAGCAAAATTCAGCTGGTTCTAATTATCTACACCAACAACCGCACAATACACAAATTTACAACAACATTTTACAGACACATCCAGCATTGATTCAAGGGTTGATGAACATGGGATCTTTCCCACCTGTGGTTGAGAATAATGGGAGCTCTAGTTATAACACAGGTGGGATATTCTTGGGGAATAGTACTCTTGGGGTAGCTTCAAATTCCACATTTAGTACTGGCAACGTTGGGGAACTTGCAATGGTTAAGATTGACTATGATGACATGCCTGGTGGAAGTTATGGAGACTGGTCCGGTGACACAGTCCAAGGGTCAAGTGCTGGCGGAGCTTTCACAATGTGGAATGAGTAG 1485 0.4404 MNIPADSEVPKVADFLGVSKSEHRSDLVAFNEIQSNDSDYLFSNTGMVPVQNSSSVATSGSFEFQETASSNIQSLTLSMGSGKVSASETSGDNSTTLSVVETAPKRTSDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAAKAYDLAALKYWGPSTTTNFQVSNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLSAVTNFDMNRYDVKSILESNTLPIGGGTAKRLKEARALDSSRKREEMIALGSSFPYGSSSSSRLQGYSLMQHQFDQPQPVLSLHSQEITPYSHDPSFHQSNYIQTQPQLHQQNSAGSNYLHQQPHNTQIYNNILQTHPALIQGLMNMGSFPPVVENNGSSSYNTGGIFLGNSTLGVASNSTFSTGNVGELAMVKIDYDDMPGGSYGDWSGDTVQGSSAGGAFTMWNE* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01851 494 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 55 368 - -
Pte1g01851 494 ProSiteProfiles AP2/ERF domain profile. 117 180 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 SMART rav1_2 216 280 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 SMART rav1_2 117 186 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 Pfam AP2 domain 117 172 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 Pfam AP2 domain 217 266 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 MobiDBLite consensus disorder prediction 82 108 - -
Pte1g01851 494 FunFam AP2-like ethylene-responsive transcription factor 215 276 - -
Pte1g01851 494 Gene3D AP2/ERF domain 216 276 IPR036955 GO:0003700|GO:0006355
Pte1g01851 494 Gene3D AP2/ERF domain 117 182 IPR036955 GO:0003700|GO:0006355
Pte1g01851 494 FunFam AP2-like ethylene-responsive transcription factor ANT 116 182 - -
Pte1g01851 494 ProSiteProfiles AP2/ERF domain profile. 216 274 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 SUPERFAMILY DNA-binding domain 116 182 IPR016177 GO:0003677
Pte1g01851 494 PRINTS Ethylene responsive element binding protein signature 256 276 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 CDD AP2 215 274 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 CDD AP2 116 182 IPR001471 GO:0003700|GO:0006355
Pte1g01851 494 SUPERFAMILY DNA-binding domain 215 275 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01851 Pte-Chr1 39793160 39795556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01851 9 495 AP2-EREBP Transcription Factor Family AT3G20840 61.967 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte1g01851 AP2 8.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01851 K09285 - qsu:112019105 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01851 1 39793160 39795556 Pte1g01851 1 39793160 39795556 RCT