Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01849 ATGACAGATCCCTACTACAATTGTTCCTATTCCTATGGTTTGTTCAACACTAATTCCCGCTACTGTTCTTCTACCAATCTATTTTTCCAGTTTCCTTCTGATCACTATGGCTTCACAAACTGCACCAATAAAATCTCTTTAGCTCAGAGTCAGTTTTCACCTCCATCTCCTCCTCTAAAAGAAGCCCTCCCTCTCCTCAATCTTTGTCCAACAAACGAGGATCTGGAGTATTCCTCTAGTACAGTGGAAGCAAACAACGATAAGCACAAGGAAAAAAACATCATCTCTTTTTCTGGTTTTACTGCAGCTGCTGCTGAAGGTGATGATGAAACTGTTTCAGTGGCTTTACGTCTAGGGCTACCATCCCCAAGTTCAGTTGATTTGGTTTCAAGTCTCTCCTCCCCAGAGATCTCCGACAAGGAAGAAGTTACCTTAGCTTCTAGCTACTCTTCAAACAGGATTCAAAAGGGCCAGTACTGGATCCCCACCCCAGCTCAGATTCTGATAGGTCCAACACAGTTCTCATGCCCGCTTTGCTTCAAGACGTTCAACCGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCTCAATATAGGAAGGGGCCAGAGTCTCTGAGGGGAACGCAACCCACCGCAATGCTTAAACTCCCTTGCTATTGCTGTGCGCCTGGATGCAAGAACAACATTGACCATCCAAGTTCCAAACCACTCAAGGATTTCAGAACCCTTCAGACACATTACAAGAGGAAGCATGGGATCAAGCCTTTCATGTGTAGAAAATGTTGCAAGGCATTTGCTGTCAGAGGTGACTGGAGAACCCATGAAAAGAATTGTGGGAAGCTCTGGTACTGCACATGTGGATCAGATTTTAAGCATAAGAGGTCTCTCAAAGATCATATGAAGGCCTTTGGAAACGGCCATGCAGCTTACGGCATTGACAGTTTTGAAGAGGATGACGATGAAGCTAGTTCAGAAATTGAGCAAGATAACGAATCCTCCCATTGTAGCTAA 1017 0.4474 MTDPYYNCSYSYGLFNTNSRYCSSTNLFFQFPSDHYGFTNCTNKISLAQSQFSPPSPPLKEALPLLNLCPTNEDLEYSSSTVEANNDKHKEKNIISFSGFTAAAAEGDDETVSVALRLGLPSPSSVDLVSSLSSPEISDKEEVTLASSYSSNRIQKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPSSKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHMKAFGNGHAAYGIDSFEEDDDEASSEIEQDNESSHCS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01849 338 Gene3D Classic Zinc Finger 255 332 - -
Pte1g01849 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 201 IPR013087 -
Pte1g01849 338 PANTHER ZINC FINGER PROTEIN WIP2 38 334 IPR043584 GO:0003700|GO:0010468
Pte1g01849 338 ProSitePatterns Zinc finger C2H2 type domain signature. 176 196 IPR013087 -
Pte1g01849 338 FunFam Zinc finger protein WIP2 227 309 - -
Pte1g01849 338 MobiDBLite consensus disorder prediction 318 338 - -
Pte1g01849 338 SUPERFAMILY beta-beta-alpha zinc fingers 239 278 IPR036236 -
Pte1g01849 338 Gene3D Classic Zinc Finger 173 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01849 Pte-Chr1 39754420 39756302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01849 59 333 C2H2 Transcription Factor Family AT3G57670 59.295 6.46e-128 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte1g01849 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01849 - - qsa:O6P43_000130 492.271