Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01848 ATGGAAGCTAATGGAAAACACGATCTTAAGACACCTCTGTTGCAGGCTCTGGAAAACGATTCTATAAGGACGATTAAGTTCAGAATAAGAGACATCAAGTGTGCATCCTGCGCAACCTCTATAGAATCTGCACTTAGCAATCTTACTGGGATACACAACATAACAATCTCACCACTTGAAGGCCGGGCTTCAATCAAGTATGAGCGCAACCTTATCAGTGCTAGGAAAATTAAGGAAACCATCGAAGATGCTGGCTTTATGGTTGATGAGTTCCCAGAGCAAGACATATTAGTTTGTCGGGTTAGGATAAAAGGAATGGCATGCACAAGCTGCTCAGAGTCTGTTGAGCGTGCCCTTCAAATGGTTGATGGAGTGAGAAAGGCTGTAGTTGGTCTAGCACTAGAAGAAGCCAAAGTTCACTTTGATCCACATGTTGCCAACACCAACAAAATTATCGAAGCAATAGAAGATGCTGGCTTTGGGGCAAATCTCATTAGCTCTGGTAATGAGGTGAACAAGTTGCATTTGAAACTTGAGGGAGTTAGTTCCCCAGAGGATGAAAATCTCATCATCTCTTCACTTGAGTCAACTGAAGGTGTGAATCACGTTGAAATGGACATGGCAGAGCACAAGGTTACCATAAGCTACGATCCAGACAGTACTGGTCCAAGAAGTTTAATACAATGCATCGAAAGACTGGGTGTTAACCCCAGTAGATATCACGCAACACTATATACTCCCTCTGGACAAAGAGAAACAGAGCAGATGCATGAAATTCGGAAATACAGGAACCAGTTTCTATTCAGCTGCCTATTTTCTGTTCCCGTGTTCATATTCTCCATGGTACTTCCTATGCTTCCTCCCTACGGAAACTGGTTAGAAATAAAAGTTCACAATATGCTCACTGTGGGGATGTTATTAAGATGGATCTTTTCAACACCTGTACAGTTTGTAGTTGGGAAGAGGTTCTATGCGGGAGCATACCATTCATTGAGAATGAAATCTGCTAATATGGATGTGCTAGTTGCTCTGGGCACTAATGCTGCTTATTTCTATTCTATCTATGTCTTAATCAAAGGATTCAGTTCTACTACTTTCCAAGGACAAGATTTCTTTGAGACCAGTGCTATGTTGATATCCTTTATTTTGTTGGGAAAGTATTTGGAGATTGTAGCTAAGGGGAAGACCTCAAATGCTCTAGCAAAGTTGACACAACTTGTTCCAGATAAAGCTATATTGCTGAGTTTGGATACTGATGGAAATGCCATTTCAGAGGTTGAAATTGATACTGAACTAATACAACGGAATGATATTATTAAGATTGTTCCAGGAGGAAACATTCCTGTCGATGGGATTGTTACGAAAGGTCAAAGTTATGTCAATGAAAGCATGATAACAGGAGAGGCGAACCCGGTTGCCAAAAGACCTGGCGACAAGGTTATTGGTGGAACCATGAATGAAAACGGACTTTTATTGGTTAAGGCCACACATGTTGGATCAGAGACTGCGCTCTCCCAAATTGTGAATCTTGTGGAGGCCGCTCAGCTTGCCAGGGCACCAGTGCAGAAACTTGCAGACCGTATTTCAAGGTTCTTTGTACCTGTGGTGGTTGCAGTGGCATTCATAACATGGTTGAGTTGGTATATCCCTGGTGTAGCTGGTTTCTACCCTAAAGATTGGATACCAAGCTCCATGGATGCATTTGAGCTTGCTTTGCAGTTTGGTATTTCAGTTCTAGTGGTTGCTTGCCCGTGCGCTCTGGGTCTAGCTACACCTACAGCTGTCATGGTTGCTTCCGGAACGGGTGCTTCCCAAGGTGTGCTTATCAAGGGTGCAGATGCACTTGAAAAGGCCCACAAGGTTAGAACCATTGTCTTTGATAAGACAGGCACGCTGACAATTGGAAAGCCTTCTGTAGTTAGCTCTGTTCTCTTTTCTAAATTTTCCATGGAAGAGTTCTGCGATATGGCTATTGCTTTGGAGGCAAACAGTGAACACCCAATAGCAAAAGCTGCAGTGCAACATGCAAAGAAGCTGCGCAAGAAGTTTGGATCTGATGCTGAGCATGTATCAGAAGTTATGGACTTTGAGGTGCACGTAGGAGCTGGAGTGAGTGGAAAAGTTGGCGATAAAACAGTTCTGGTTGGGAATAAGAGACTGATGAATTCTTTTGATGTCTTAATATATCCCGAGGTTGAGAAGTATGTTTCTGAAAATGAGGTTCTAGCTCGAACCTGTGTGTTAGTCTCTATTGATGGAAAGGTCGCTGGTGCATTCTCTGTAACTGATCCTGTGAAGCCAGAGGCTGAGCGTGTCATATGTTTTCTCCACAAAATGGGAATCTCGTGCATCATGGTCACAGGAGACAACTGGGCTACTGCAAATGCTATTGCAAATGAAGTTGGCATCGACAAGGTCTTTGCAGAGACAGATCCACTAGGGAAAGCCGATAAGATCAAAGAATTACAGATGACAGGAACTACTGTGGCCATGGTTGGAGATGGGATAAACGACTCACCGGCCTTAGTTGCTGCCGACGTTGGGATGGCAATTGGTGCTGGAACTGACGTGGCTATCGAGGCAGCTGATATAGTTCTTATGAAGAGCAACTTAGAAGATGTCATAACAGCAATAGATCTTAGTAGAAAAACCATGTCTCGTATTCGTCTCAACTACATTTGGGCCCTTGGCTACAACATCTTAGGAATGCCAATTGCTGCTGGGGTATTGTATCCCTTCACTGGAATCAGGTTGCCACCTTGGCTTGCCGGCGCTTGTATGGCAGCTTCATCCATCAGCGTGGTTTGTTCATCTCTCTTGTTGCAGTTCTATAAGAAGCCTTTGCATGTGGAACACAAGTGA 2862 0.4364 MEANGKHDLKTPLLQALENDSIRTIKFRIRDIKCASCATSIESALSNLTGIHNITISPLEGRASIKYERNLISARKIKETIEDAGFMVDEFPEQDILVCRVRIKGMACTSCSESVERALQMVDGVRKAVVGLALEEAKVHFDPHVANTNKIIEAIEDAGFGANLISSGNEVNKLHLKLEGVSSPEDENLIISSLESTEGVNHVEMDMAEHKVTISYDPDSTGPRSLIQCIERLGVNPSRYHATLYTPSGQRETEQMHEIRKYRNQFLFSCLFSVPVFIFSMVLPMLPPYGNWLEIKVHNMLTVGMLLRWIFSTPVQFVVGKRFYAGAYHSLRMKSANMDVLVALGTNAAYFYSIYVLIKGFSSTTFQGQDFFETSAMLISFILLGKYLEIVAKGKTSNALAKLTQLVPDKAILLSLDTDGNAISEVEIDTELIQRNDIIKIVPGGNIPVDGIVTKGQSYVNESMITGEANPVAKRPGDKVIGGTMNENGLLLVKATHVGSETALSQIVNLVEAAQLARAPVQKLADRISRFFVPVVVAVAFITWLSWYIPGVAGFYPKDWIPSSMDAFELALQFGISVLVVACPCALGLATPTAVMVASGTGASQGVLIKGADALEKAHKVRTIVFDKTGTLTIGKPSVVSSVLFSKFSMEEFCDMAIALEANSEHPIAKAAVQHAKKLRKKFGSDAEHVSEVMDFEVHVGAGVSGKVGDKTVLVGNKRLMNSFDVLIYPEVEKYVSENEVLARTCVLVSIDGKVAGAFSVTDPVKPEAERVICFLHKMGISCIMVTGDNWATANAIANEVGIDKVFAETDPLGKADKIKELQMTGTTVAMVGDGINDSPALVAADVGMAIGAGTDVAIEAADIVLMKSNLEDVITAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGVLYPFTGIRLPPWLAGACMAASSISVVCSSLLLQFYKKPLHVEHK* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01848 953 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 18 949 - -
Pte1g01848 953 FunFam Copper-transporting ATPase HMA5 96 167 - -
Pte1g01848 953 ProSiteProfiles Heavy-metal-associated domain profile. 97 163 IPR006121 GO:0046872
Pte1g01848 953 SUPERFAMILY HMA, heavy metal-associated domain 20 89 IPR036163 GO:0046872
Pte1g01848 953 CDD HMA 26 86 IPR006121 GO:0046872
Pte1g01848 953 Gene3D - 18 89 - -
Pte1g01848 953 FunFam Probable copper-transporting ATPase HMA5 749 889 - -
Pte1g01848 953 ProSiteProfiles Heavy-metal-associated domain profile. 172 238 IPR006121 GO:0046872
Pte1g01848 953 Pfam E1-E2 ATPase 424 603 - -
Pte1g01848 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 371 618 IPR023298 -
Pte1g01848 953 CDD HMA 101 162 IPR006121 GO:0046872
Pte1g01848 953 Pfam Heavy-metal-associated domain 187 234 IPR006121 GO:0046872
Pte1g01848 953 Pfam Heavy-metal-associated domain 27 86 IPR006121 GO:0046872
Pte1g01848 953 Pfam Heavy-metal-associated domain 100 160 IPR006121 GO:0046872
Pte1g01848 953 SUPERFAMILY HMA, heavy metal-associated domain 168 239 IPR036163 GO:0046872
Pte1g01848 953 SUPERFAMILY HMA, heavy metal-associated domain 94 168 IPR036163 GO:0046872
Pte1g01848 953 CDD HMA 193 243 IPR006121 GO:0046872
Pte1g01848 953 Pfam haloacid dehalogenase-like hydrolase 621 846 - -
Pte1g01848 953 NCBIfam heavy metal translocating P-type ATPase 338 941 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pte1g01848 953 CDD P-type_ATPase_Cu-like 266 943 - -
Pte1g01848 953 Gene3D - 616 882 IPR023214 -
Pte1g01848 953 ProSiteProfiles Heavy-metal-associated domain profile. 23 89 IPR006121 GO:0046872
Pte1g01848 953 FunFam Copper-transporting ATPase 1, putative 393 515 - -
Pte1g01848 953 Gene3D - 171 245 - -
Pte1g01848 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 627 633 IPR018303 -
Pte1g01848 953 PRINTS H+-transporting ATPase (proton pump) signature 832 848 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g01848 953 PRINTS H+-transporting ATPase (proton pump) signature 863 888 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g01848 953 Gene3D - 636 765 IPR023299 GO:0000166
Pte1g01848 953 SUPERFAMILY Calcium ATPase, transduction domain A 425 511 IPR008250 -
Pte1g01848 953 FunFam ATPase copper transporting beta 20 90 - -
Pte1g01848 953 SUPERFAMILY HAD-like 623 938 IPR036412 -
Pte1g01848 953 Gene3D - 98 168 - -
Pte1g01848 953 NCBIfam HAD-IC family P-type ATPase 378 909 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g01848 953 SFLD p-type atpase 607 884 IPR044492 -
Pte1g01848 953 ProSitePatterns Heavy-metal-associated domain. 103 132 IPR017969 GO:0046872
Pte1g01848 953 PRINTS P-type cation-transporting ATPase superfamily signature 625 639 - -
Pte1g01848 953 PRINTS P-type cation-transporting ATPase superfamily signature 757 768 - -
Pte1g01848 953 PRINTS P-type cation-transporting ATPase superfamily signature 855 867 - -
Pte1g01848 953 PRINTS P-type cation-transporting ATPase superfamily signature 832 851 - -
Pte1g01848 953 PRINTS P-type cation-transporting ATPase superfamily signature 779 789 - -
Pte1g01848 953 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Pte1g01848 953 NCBIfam copper ion binding protein 101 161 IPR006122 GO:0005507
Pte1g01848 953 SFLD Haloacid Dehalogenase 607 884 - -
Pte1g01848 953 Gene3D - 393 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01848 Pte-Chr1 39739084 39746441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01848 19 952 Primary Pumps ATPases AT1G63440 58.493 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01848 K17686 - csin:114270619 1474.14