Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01840 ATGGGAGCACGTTGCTCCAAGTTCTCCCTATGCTGTTGGCCTTCACATGCCAAATCGAATCTTCATGCCTCATCTGATATTGATGATGGTGATAAGAATGATAAGTATTCATTACCTGGGTTCAAAGAGTTCACCTTGACTCAGCTCCGAGAAGCCACCTCTGGGTTTTCACCTGACAACATTGTATCAGAGCATGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAAGCTTGAAGGTGATGAGCTATGGGTTGCCGTTAAGCGCTTCAACAGGTCAGCTTGGCCCGATTCTAAACAATTCCTGGAGGAAGCAAGAGCGGTTGGCCAGCTAAGAAGTGAGAGGTTGGCTAGTCTGGTTGGATGTTGCTGTGAAGGTGAAGAGAGATTATTAGTCGCAGAGTTCATGCCTGATGAAACTCTTTCCAAGCATCTTTTCCATTGGGAGACCCAGCCAATGAAATGGGCAATGAGGCTGAGAGTAGCTCTGTATTTGGCGCAAGCATTGGACTATTGCAGCAGTAGTGGGAGGGCTTTGTACCATGATCTCAATGCCTATAGAATTCTATTCGATCAGGATGGTAATCCTAGGCTTTCCTGCTTTGGACTCATGAAGAATAGCAGAGATGGCAAGAGCTATAGTACAAATTTAGCTTTCACGCCTCCAGAGTACTTGAGAACAGGAAGAATTACTCCTGAAAGTGTCGTTTATAGTTTCGGTACTCTCTTGCTTGATCTTCTTAGTGGCAAACACATCCCTCCGAGTCATGCACTTGATCTGATACGAGGAAAGAATTTTCAGACGCTGATGGATTCATGTTTGGTTGGTCATTTCTCAAATGACGACGGAACTGAGTTAGTGAGGTTAGCTTCACGCTGTTTACAGTATGAACCCCGTGAGAGGCCCAATACCAAATCTCTTGTGACTGCGCTAACTTCTCTTCAAAAGGAAATAGGGGTCCCATCACACGTGTTGTTAGGTATACCACATAGAAGTAAATCATTGCAAAAGGTTACATTAACACCTTTAGCTGAAGATTGTTCAAGAGTAGACCTCACTGCAATACACGAAATTCTGGAGAAGGTCGGATACAAGGACGATGAAGGAGTAGCAAACGAGCTCTCCTTCCAAATGTGGACCACTCAAATCCAAGAAACCCTGAATTCTAAGAAGCGGGGAGATGCTGCTTTTCGGGCCAAGAATTTCTCTACGGCCATTGATTACTACACACAATTTATCGATGGAGGAACCGTGATATCACCAACAGTGTATGCGAGGCGATGCTTATGCTACCTAATGATTGATATGCCGAAAGAAGCTCTAGGAGATGCTATGCAAGCCCAAACAATATCCCCAGGTTGGCCAACTGCATTTTATCTTCAAGCTGCCGCCCTATTCAGTCTTGGGATGAACAATGATGCACAAGAAAGTCTGAAAGACGGTTCATCATTAGAACCCAGAAAACATAGAAACTGA 1476 0.4458 MGARCSKFSLCCWPSHAKSNLHASSDIDDGDKNDKYSLPGFKEFTLTQLREATSGFSPDNIVSEHGEKAPNVVYKGKLEGDELWVAVKRFNRSAWPDSKQFLEEARAVGQLRSERLASLVGCCCEGEERLLVAEFMPDETLSKHLFHWETQPMKWAMRLRVALYLAQALDYCSSSGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFQTLMDSCLVGHFSNDDGTELVRLASRCLQYEPRERPNTKSLVTALTSLQKEIGVPSHVLLGIPHRSKSLQKVTLTPLAEDCSRVDLTAIHEILEKVGYKDDEGVANELSFQMWTTQIQETLNSKKRGDAAFRAKNFSTAIDYYTQFIDGGTVISPTVYARRCLCYLMIDMPKEALGDAMQAQTISPGWPTAFYLQAAALFSLGMNNDAQESLKDGSSLEPRKHRN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01840 491 FunFam probable serine/threonine-protein kinase At4g35230 31 135 - -
Pte1g01840 491 Gene3D Tetratricopeptide repeat domain 380 490 IPR011990 GO:0005515
Pte1g01840 491 SUPERFAMILY Protein kinase-like (PK-like) 34 317 IPR011009 -
Pte1g01840 491 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Pte1g01840 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 490 IPR045845 GO:0004672|GO:0009742
Pte1g01840 491 ProSiteProfiles Protein kinase domain profile. 59 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01840 491 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Pte1g01840 491 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Pte1g01840 491 SUPERFAMILY TPR-like 389 487 IPR011990 GO:0005515
Pte1g01840 491 FunFam probable serine/threonine-protein kinase At4g35230 384 491 - -
Pte1g01840 491 Pfam Protein tyrosine and serine/threonine kinase 72 311 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01840 Pte-Chr1 39664590 39669071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01840 44 330 Glycoside Hydrolase AT3G07070 32.803 8.58e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte1g01840 PK_Tyr_Ser-Thr 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01840 - - cit:102623004 843.958