Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01823 ATGGGTGAGGAGGTCAAGATGACCGATTATGGAACTCCTTGTGGTAGGGGTGGGGGTGGGGGTGGGGGCAGTGGAAGTGGCGGGGGTAGTGATGAAGAGCGATTTTTGGGGTGGGAGGTCGGTCTTCCCAGTGCTGATGATCTTACTCCGTTGTCTCAGCGCTTGATCCCGCCGGAGCTTGCTTCTGCTTTCAGTATTACGCCGGAGCCTTGTCGGACGGTCCTGGATGTGAATCGTGCTTCGAAGAATACCTTATCGACTATTCGTGGAGGAAGCTCGCAGGGCTTTTCGTCGAACAATTTCAAGTCTTTGGATGAGGATTGCGATCGTGACCCGATGGCTGTGGAAGCAGATGAAGAGGTTGACCGAGATGGGTCTGCATCGGATTCCAGAAAATTGAGGAAAGTTCATTCTACTGAAGAAGCTGATTCAGCTTTAAGGACTGATAATCCCACCGATGACCCATCTGCTAGGACCTTGAAGCGACCTCGGCTTGTCTGGACACCACAGCTGCATAAGAGATTTGTTGATGTAGTAGCTCACCTCGGGATTAAGAACGCTGTGCCAAAAACCATTATGCAATTGATGAATGTTGAAGGTTTGACTAGAGAAAATGTTGCCAGTCATTTACAAAAGTATAGACTTTACTTGAAGAGGATGCAGGGTTTGTCAAACGATGGTCCCTCCTCATCGGACCAGCTCTTTGCCTCCACGCCAGTGCCACAGAGCTTGCACGAGTCAGGTGGAAATGGGCATATGCCCATGCCAATTCCGATGCCTTATCCACCTATGAATATGATGCCTATGCCGGTTTTGGGAATGAATCATGGCCATGGTCACCCACGGATGGGAATGACTATGAGTAATCCAAATGGACGGGTTGGGTTCCCCGGCTTTGAAGCACGTCAGTATAGTATGATGCAGCAAGGCGACTGGTCTGGCAATAATTTTGGCTCTGTAATGTCGTACCCGCATCACGTTGCTCCAAATGACAAGTGA 999 0.4985 MGEEVKMTDYGTPCGRGGGGGGGSGSGGGSDEERFLGWEVGLPSADDLTPLSQRLIPPELASAFSITPEPCRTVLDVNRASKNTLSTIRGGSSQGFSSNNFKSLDEDCDRDPMAVEADEEVDRDGSASDSRKLRKVHSTEEADSALRTDNPTDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDGPSSSDQLFASTPVPQSLHESGGNGHMPMPIPMPYPPMNMMPMPVLGMNHGHGHPRMGMTMSNPNGRVGFPGFEARQYSMMQQGDWSGNNFGSVMSYPHHVAPNDK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01823 332 NCBIfam myb-like DNA-binding domain, SHAQKYF class 163 215 IPR006447 GO:0003677
Pte1g01823 332 SUPERFAMILY Homeodomain-like 159 219 IPR009057 -
Pte1g01823 332 MobiDBLite consensus disorder prediction 103 160 - -
Pte1g01823 332 MobiDBLite consensus disorder prediction 224 250 - -
Pte1g01823 332 Gene3D - 159 221 - -
Pte1g01823 332 MobiDBLite consensus disorder prediction 224 245 - -
Pte1g01823 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 218 IPR017930 -
Pte1g01823 332 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 29 304 IPR044841 GO:0003700|GO:0006355
Pte1g01823 332 FunFam Two-component response regulator 158 221 - -
Pte1g01823 332 MobiDBLite consensus disorder prediction 85 102 - -
Pte1g01823 332 MobiDBLite consensus disorder prediction 85 161 - -
Pte1g01823 332 Pfam Myb-like DNA-binding domain 166 214 IPR001005 -
Pte1g01823 332 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01823 Pte-Chr1 39570070 39571355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01823 1 277 G2-like Transcription Factor Family AT3G46640 54.608 8.30e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte1g01823 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01823 - - zju:107411020 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01823 1 39570070 39571355 Pte1g01823 1 39570070 39571355 RCT