Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01814 ATGGATCCCAACTTTGATGGAATTCCTGGTTTTTACAACGTTAACCACCAGAATGTTCTCCCCAACTCGAATCAGTTCCCGAGTATAACGGAAGATGTGTATGAATTTGACAAATACTTTTCTGACGATGTCTCCGCGACTTCAGCCTTTCCTAACAATGATCCTAACTTCGGACCCATACTTTCTCCTCCTGCGGACGGTGTCGGGATGGTTGCTCATCCAAAAGTAAGTCTTGGTGCAGGGGAAGAGTCATTAGTCTCTTCCTGGATACCTAACACGGATGAACCAAGTTTATATTTGCCAACTGCAATGGTGGGGTTTGCCACAGTCTCTAGCTTTGAGGACAATGAATTTTCTGAGACTGTCAAACACATAACTCAGATCCTCATGGAGGAGAACATGGAAGAAAGGCGTTCCATGTTTTATGACCCTTTGAGTTTGCAGGTCACTGAGAAGTCTTTCTATGATGCTCTAGGAGGCAGCTATTCGCTTTCCCCCGATCAGCACCCTCTTGTTTCTTTCGGTGATAAAGTTGAGAGTCCAGATGGTAATGTTTCTGGGACTAGTACTGATTCGGGTAACATTAGCAATGGGACTAGTAATACAAGCACCAGCAACTCTAGTGATCCTAGTAATTCATGCACCAACAGCTCAGTTGATCCTCTGTTGCCATCCGATGCATATGACAACAAACCTTTTGCATCAGACACACGTTTGCTTGGAAGCTTGAATTCCCAATCAAATAGACAGCTGACCTCGCAAAAGGTCAATCAGCCTCTAAGTACTACTGCAAACATAGTCGGGCTTTTGGACTCTTCAGCTAGTGAACTTCTGTTTCAGAATATATTTAGTGACAAAGAATCGGTCTTGCAATTTAAGAGAGGGTTGGAGGAAGCAAGCAAGTTCCTTCCGAAGAATGCTGAACTTACCACTGGTTTAGATAGCAGTACTTTGGGTCCAGCATTAAGTGGCGAGGGTAACGTTAGGGAAAAAGGTGTGACTGTGAAGGAAGATTTAGCAAAAGGGCTAAAGGGAAGAAAGAACCACGTCCTTGAAGAAAGTGATTTTGAAGAAGGGAGGAGTAGAAAGCAGTCTGCAATTTATGTCGAAGAGGCTGAATTATCAGAATTGTTTGACAAGGTTTTACTTGATACCGGACCTCCAATGTGTTCTGTGAACCAAGACGCTCAAGAGAGAAACTGTGGATTGAAGGAATCTCCTAAGAAACAGCTTAATACATCTGAAGGAGGGATGACTCGCCCTAAGAAACAAGGCAGGAAGAAAGAAACTGTGGATTTAAGGAATCTCCTACTCTTATGTGCGCAAGCAGTATCTGGTAATGACAGCAGGACTGCATCTGAACTCCTAAAGCAGATCAGGCAACATGCCTCTCCTCTTGGTGATGGTTCACAGAGGCTTGCACATTTTTTCGCTAATGGTCTTGAGGCACGTCTAACTGGTAGTGGCAACGGAGTCCAAATATACTATAAGTCCCTAGCTTCCTCTAGGGTCTCTGTTGCTGATAAATTGAAAGCTTACAAGGTCCATGTTTCTTCTTGCCCATTCAAGAAATTTGCATTATTTTTTGCTAATAAAATGATCATGAAAGCAGTTGAACGTAGTGACAACCTTCATATCATTGATTTTGGTATCGGATTCGGTTTCCAATGGCCAATTCTTATTAAGTTTCTCTCTAACAGACATGGGGGTCCTCCAAAGTTGCGCATTACAGGAATAGAACTTCCCCAAACTGGCTTCCGCCCAAAAGAAAGAATCGAGGAGACTGGTCATCGACTAGCAACCTATTGCAAGCGGTTCAATGTTCCATTTGAGTTCAATGCTATAGCATCACAACGATGGGAAACTATACAGATTGAAGAACTTAAGATTGACAGTAGGGAGTTGCTTGCCGTGAATTGTATGTTTAGGTTTAAGAACCTACTTGATGAGACAGTTGAAGTTGACTGCCCAAGAAATGCAGTTTTGAGCCTAATTAGGAAGATGAATCCCAAAATTTTTGTGCAAAATATTCTCAACGGAGCTTACAATGCTCCCTTCTTTTTCTCCAGATTCAAAGAGGCACTTTTTCATTTCTCAGCACTGTTTGATATGTTCGATGCAATAATACCTCGTGAAAATGAATACAGATTGATGTTTGAGAAAGAGTTTTATGGTCGGGAGATTATGAATGCTATAGCATGTGAGGGCTTAGAGAGGGTTGAGAGGCCTGAAACATACAAGCAATGGCAGGCTCGACTTACAAGGTGTGGCTTTAGGCAGCTTCCTCTGGATCATGAAATTATTGGCAAATTTAGGGATAAGTTAAAAGAATGGTACCACCGGGATTTTGTGATTGATGAAGACTGCAACTGGATGCTTCAGGGTTGGAAGGGTCGGATCGTTTATGCTTCTTCTTGCTGGGTGCCAGCATAG 2433 0.4266 MDPNFDGIPGFYNVNHQNVLPNSNQFPSITEDVYEFDKYFSDDVSATSAFPNNDPNFGPILSPPADGVGMVAHPKVSLGAGEESLVSSWIPNTDEPSLYLPTAMVGFATVSSFEDNEFSETVKHITQILMEENMEERRSMFYDPLSLQVTEKSFYDALGGSYSLSPDQHPLVSFGDKVESPDGNVSGTSTDSGNISNGTSNTSTSNSSDPSNSCTNSSVDPLLPSDAYDNKPFASDTRLLGSLNSQSNRQLTSQKVNQPLSTTANIVGLLDSSASELLFQNIFSDKESVLQFKRGLEEASKFLPKNAELTTGLDSSTLGPALSGEGNVREKGVTVKEDLAKGLKGRKNHVLEESDFEEGRSRKQSAIYVEEAELSELFDKVLLDTGPPMCSVNQDAQERNCGLKESPKKQLNTSEGGMTRPKKQGRKKETVDLRNLLLLCAQAVSGNDSRTASELLKQIRQHASPLGDGSQRLAHFFANGLEARLTGSGNGVQIYYKSLASSRVSVADKLKAYKVHVSSCPFKKFALFFANKMIMKAVERSDNLHIIDFGIGFGFQWPILIKFLSNRHGGPPKLRITGIELPQTGFRPKERIEETGHRLATYCKRFNVPFEFNAIASQRWETIQIEELKIDSRELLAVNCMFRFKNLLDETVEVDCPRNAVLSLIRKMNPKIFVQNILNGAYNAPFFFSRFKEALFHFSALFDMFDAIIPRENEYRLMFEKEFYGREIMNAIACEGLERVERPETYKQWQARLTRCGFRQLPLDHEIIGKFRDKLKEWYHRDFVIDEDCNWMLQGWKGRIVYASSCWVPA* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01814 810 MobiDBLite consensus disorder prediction 182 223 - -
Pte1g01814 810 MobiDBLite consensus disorder prediction 398 427 - -
Pte1g01814 810 MobiDBLite consensus disorder prediction 398 419 - -
Pte1g01814 810 MobiDBLite consensus disorder prediction 172 231 - -
Pte1g01814 810 Pfam GRAS domain family 433 807 IPR005202 -
Pte1g01814 810 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 365 801 IPR005202 -
Pte1g01814 810 ProSiteProfiles GRAS family profile. 424 808 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01814 Pte-Chr1 39436658 39440019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01814 121 810 GRAS Transcription Factor Family AT1G07530 50.140 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g01814 GRAS 5.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01814 - - pcin:129314564 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01814 1 39436658 39440019 Pte1g01814 1 39436658 39440019 RCT
Pte1g01814 1 39436658 39440019 Pte17g00827 17 23079839 23084410 RCT