Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01811 ATGACAATGGTTCAGAAGATCGCAGAGTTGATGGAATACTCGTTCTTATTGGATAAAGCAGATGAATGCGAGGACCCTTTTATGCAGCTAGTGTATGCCACATCATGGGCAATATCTGTTTATTTTACTTACCAGAGAACCTGGAAACCCTTTAATCCAATACTTGGAGAAACATATGAAATGTTCAATCACGATGTAATTACTTTCATCTCAGAGCAGGTTTGGCATGTTGCTGATGTTCCAGAGAATGATCAATTCCAATACTCATATTTTGCACATAAAATAAATAGCTTTGACACAGCCCCGAGAAAGTTGCTGGTATCAGACTCTCGCTTGCGCCCTGATCGATTGGCACTTGAGAAGGGCGACATATCTAAATCTGGTGCAGAAAAAAGCAGCTGTTCCGTATCTCGGGCCTATACTTCCAAACCGTGTGGACTTTGTCCGATTTGGTGCTCAACCACCAGTGTCGGTGCAGGGGAAGAGTCATTAGTGCATCAATGGAATGCTAACACTGATGAACCAAGATTATATTTGCCAACTGCAATGATGGGGTTTGCCACAGACTCTAGTTTTGAGGACAATGACTTTTCTGAGACTGTCAAACACACCAAACCTTCCCGTCGATGTGATCTCTTGCAAACTTTGGATCCATTATTAACTGGTGAGACTAAAGTTGGGGAGAAAGGTGCAACTGTCAAGGTAGATTTACAAAAAGGGTTAAAGGGAAGAAACGTCTTCCTTGAAGAAAGTGATTTTGAAGAAGGGAGAAGTAGAATGCAGTCTGCAATCTATGTTGAAGAGGCTGAATTATCAGAATGTTTGACAAGATTTTACTTGACACTGGCCCTCCAATCTGTGATGAAAACCAAGGCAGAAAGGTCGGATGGTGCAAGACTCGCCCTAAGAAACAAGCCAGGAAGAAGGAAACTACCTGGGTGTCCTCCAGAGTTGCGCATTACAGGAAGAGAACTTCCCCAACTTGGCTTCCACCCAAAAGACAGACTCGAGGAGACTGGTCATCAACTAGCAACGTATTATGGGAATAGAACGTATTGCAAGCGATTCAATGTTCCATTTGAGTTCAATGCTATAGCATTACAAAGATGGGAAACCATACAAATTGAAGAACTTAAGATTGACAGCAGAGAATTGCTTACTATGAATTGTATGCTTAGGTTTATGAACTTACTTGATGAGACAGTTGAAATAAAGTGCCCTAGAAATGCGGTCCTGAGCTGCTTAATTAGGAATTAG 1257 0.4185 MTMVQKIAELMEYSFLLDKADECEDPFMQLVYATSWAISVYFTYQRTWKPFNPILGETYEMFNHDVITFISEQVWHVADVPENDQFQYSYFAHKINSFDTAPRKLLVSDSRLRPDRLALEKGDISKSGAEKSSCSVSRAYTSKPCGLCPIWCSTTSVGAGEESLVHQWNANTDEPRLYLPTAMMGFATDSSFEDNDFSETVKHTKPSRRCDLLQTLDPLLTGETKVGEKGATVKVDLQKGLKGRNVFLEESDFEEGRSRMQSAIYVEEAELSECLTRFYLTLALQSVMKTKAERSDGARLALRNKPGRRKLPGCPPELRITGRELPQLGFHPKDRLEETGHQLATYYGNRTYCKRFNVPFEFNAIALQRWETIQIEELKIDSRELLTMNCMLRFMNLLDETVEIKCPRNAVLSCLIRN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01811 418 Pfam Oxysterol-binding protein 74 133 IPR000648 GO:0008289
Pte1g01811 418 Pfam Oxysterol-binding protein 2 76 IPR000648 GO:0008289
Pte1g01811 418 Pfam GRAS domain family 312 415 IPR005202 -
Pte1g01811 418 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 76 IPR000648 GO:0008289
Pte1g01811 418 SUPERFAMILY Oxysterol-binding protein-like 1 76 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01811 Pte-Chr1 39423140 39431847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01811 312 417 GRAS Transcription Factor Family AT1G07530 57.547 2.34e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g01811 GRAS 1.1e-15 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01811 - - aew:130771090 144.821