Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01806 ATGAAGTGCTTCCATTTCAGTAACGGGGAGAGGCGCGAAGATGATGAGAATGGCGTCGTTTCTAGGAATTCAAAGGTTTCATGGGTTCGCTCTCTAAGCGTTGCTTCCAGTAGCTTTGACACCAGGCGCTCCGAGTTTGATTCTGAGACAAGAGACTTGTCCGATTCAGTTGGCTTCCACGAATTCTTGTCGCAGAGAAGAGCGAATCCTCTACGGGTATTCTCATTCTCGGAGCTCAAATCTGCTACCCGTGGCTTCAGTAGGTCGTTGTTGATCGGGGAAGGCGGATTCGGCTGTGTCTACAAAGGCTTTGTCAAAATAACTAATGAAGAAGAAGAAAAGGACAAACAAAATGTATTAGTTCATTGCCCGTCTTATTCTTCTTGTACCAAGCTCGAAGTCGCTATCAAGCAGCTCAATCGAAATGGATTCCAGGGGCATAAGGAGTGGATAAATGAAGTGAACTTAATGGGTGTAATCAAACATCCAAATCTTGTCCAGCTTGTGGGATATTGTGCTGAGGATGATGAAAGAGGGATTCAAAGACTTCTAGTGTATGAGCTTATGCGGAACACAAGCTTGGAGGATCACCTCTTTGCTCGAGATTCATCCCTGCTTCAATGGATGGCTAGATTAAAGATTGCTCAAGATGCAGCCCGTGGATTGGCATACCTCCACGAAGAAATGGACTTTCAGCTAATTTTCCGGGATTTTAAAACCTCCAATATTCTTCTTGATGAGGAATTCAATGCAAAACTTTCGGATTTTGGACTAGCTCGTCAAGGGCCCCCAGAAGGATTCAGCCATGTCTCAACAGCTGTTGTTGGAACAGTAGGGTATGCTGCCCCAGAGTATGTCTACACCGGGAGGCTTACTTCTAAGAGTGATGTCTGGAGCTTTGGTGTAGTTCTCTACGAGCTTATCACTGGAAGGCGAGCTTTGGAAAAGAACCTGCCTAAGAGTGAACAGAAGCTTTTGGACTGGGCAAGACGTTATGTTTCAGATGCAAAGAAGTTCCATCTCATCATAGATCCAAGACTTGAAGGACGTTATTGCATCAAGTCTGCTCAAAAGCTTGCTTTTCTTGCAAACAAATGTCTAATGAAGCAACCAAAGTCCCGCCCAAAAATGAGCGAGGTAGTTAAGATCCTTGAGAACATCATTCAAGAGTTCTTCTCTCAGGAGGAAAGTGTCCCTCAAGCTATCTACGAAACAGAAGCAAAGGAAGAAGCTGCAGAGGAGACTGAAATTGAACCTGCCAAACGGGGGAACAGTTATCTGAGGAAGGTTTTTGATATCAGAGACATGGTCAGTTTAAGAACCAAGTCTATAGGTAAGTTGGATTGGAGAAACTGGACTCCGAGCTTGGTAAGAACTTAA 1380 0.4449 MKCFHFSNGERREDDENGVVSRNSKVSWVRSLSVASSSFDTRRSEFDSETRDLSDSVGFHEFLSQRRANPLRVFSFSELKSATRGFSRSLLIGEGGFGCVYKGFVKITNEEEEKDKQNVLVHCPSYSSCTKLEVAIKQLNRNGFQGHKEWINEVNLMGVIKHPNLVQLVGYCAEDDERGIQRLLVYELMRNTSLEDHLFARDSSLLQWMARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEEFNAKLSDFGLARQGPPEGFSHVSTAVVGTVGYAAPEYVYTGRLTSKSDVWSFGVVLYELITGRRALEKNLPKSEQKLLDWARRYVSDAKKFHLIIDPRLEGRYCIKSAQKLAFLANKCLMKQPKSRPKMSEVVKILENIIQEFFSQEESVPQAIYETEAKEEAAEETEIEPAKRGNSYLRKVFDIRDMVSLRTKSIGKLDWRNWTPSLVRT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01806 459 Gene3D Phosphorylase Kinase; domain 1 66 188 - -
Pte1g01806 459 SUPERFAMILY Protein kinase-like (PK-like) 67 385 IPR011009 -
Pte1g01806 459 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 189 397 - -
Pte1g01806 459 Pfam Protein tyrosine and serine/threonine kinase 92 384 IPR001245 GO:0004672|GO:0006468
Pte1g01806 459 FunFam Serine/threonine-protein kinase BIK1 58 188 - -
Pte1g01806 459 Gene3D Transferase(Phosphotransferase) domain 1 189 410 - -
Pte1g01806 459 ProSiteProfiles Protein kinase domain profile. 86 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01806 459 PANTHER OS01G0588500 PROTEIN-RELATED 49 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01806 Pte-Chr1 39370721 39373461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01806 3 384 Glycoside Hydrolase AT3G07070 41.710 3.34e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte1g01806 PK_Tyr_Ser-Thr 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01806 - - vvi:100258611 692.189