Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01803 ATGGGAAAGCACTTGGTCGCCAATCATCCTAAAGTTCATATCGATGACAACAATCCAGGCTGCAAGTGGGGCCCATTTCAAGTTCTTTACTACCACCATTGGCGTCATGTCAAAAAGATGTTTTCTCACACAAAGCATCATGAAACAAAACAGGGCAGATACACCAGAAAAAAGATACTATTCAACCATTACTGCAATGTATCACAAGAGTCTGAGGATGCTGAAGCTGAAGTCATATCTGCTAAGAGTAAGTCTTCAAAAAAGAATCAGGATGTGTTCAAGAAAGAGGACTACGAATGCAAGATGTCAAGTCCCCCTCCAGGGAAACAATTACATCCATTCTGTCAAAAACATGGTTTAGAGTCTTCAGACAATTGTCTTGATTGTTTGAGCAACTTTGGAAACAAGGCTGATGATTCTGCAAACCAAAGGCACTATTTCTTTCTGCGAAAGCCTCCAGAAGAACTGGTAGCTGGCGATGGAAAGAGCAGACTTTTTTCTACGAATGCCGGGGATCACTTAAAAGATGATCAGGCTGCACAGAGTCCTGTACTTACAGGAGAATATGATACAAAACTATTCAAATATGCATGTCGACAAGAGCTCACGGGAGCAAACAAAAGTACTACAGACATTTCCAGTAAAATGATGGAATATAGTGATGTTTTGGAAGTAATCAAGAGTAAGAAGGATATGTTCCTCAAGATTCTACATGATCTCGATTTGAATAAGAAGCCATCCTATTGTCTGCAGGCTTCCAATTCCAGCACAAAGTTGATGAAATCCGGTTCATTTCCAGCAGCTAAATCAGTGGTACCCGACTTCAAACATTTAAGTATCAGTACTCTCAAACACAAGCAGACAGAAATTTGGGCTTTCCCAAAGGTAGAAGAACTGTATATTGCTTCACAAACACAAGAATATGTAAAGCCTGTGGATTCACCAACTGATGACATCGTTGCTGGTAGTGGCCTGAAGGGAAAGACACACAAGTTCTCTTCGGGGACCTCTGTAGGGTCAAACCAGCAAAGCTGGAACCAATTGGTTGTTCATCGTTTTAAAACTATGAAGAAGAAAATAAAACATGCTCTCACGGAGTTCAAGAAGGATAAGGATAGTAAAAGTAATTCTGCTGAAGCAATCAAACAGAAAATTTCCACTGACGAACAAGAGGTAGTTAAGCCTGTCATAGTCAACAATGAAGATTGCAGAGAGTATGTAGACAATTGCCAGGAATCGTATGAGACTTGGGATTCTAATAGATGCGAACGAAAAGTTTCCATGGTGAGAAGAACAGCCTCACTAAAAGAGTCCCTCAATAGATATACCAATCTATTTGAACAAAGTTTTGGGAAGGACAAGAAGTGGCAAAACTCAAAGTCAAAAAGCTTGAAATTGACAAATGAAGACAAGGTTCGGATAAGTAGGTCCACTTCAATGTCATATGGAAGAAATCTTTCTCTGCCAGATCACATATTTCTGTACGAAGCATCTTATGACAGCCAAAACTCATTGATACCTGAGAGAATTTCTGTGGATACCGATATGAAGTCAGGAAGGCTATCATTCAATGCTGATGAACAGGTGGATGCTGTTGAAGAGACTAGACTATACAATGAAAACGTAGAAAGCAGGCACAGCAACAATGAGGACAACGCAGAGATAAGTGAATCTGGGTATGATAAGCATTTGGAATTAGAATTGACTAGCAGCTGTCAACAAGCAAACAAGGAAACAGAATGTACTACAGATCTTTACAGAGGCCTAATTGAACAAGCACAAGAAGCAGTGATACTTGACGATGAGCATCAAGACCACATCACCAGCTTCATGGAAGATTCCTTCACTGGATGCTCGTCCACCGCTGAACCAGGGTGTTCCGTTGATGATCCAAAAACGCAGAGCATACATTCACTACCGGACTCGACATGCGAGAGAACGGATGATGAGGTTGATAAAATGCAACCTGCAGACAAGTATCAGCTATATCATTGCTTACGTCCTGAATTTGATTTGGATGGTAGCTCGGACTTCGAATATTTAGAATATATTCTCAAGTGTTTAGGTATAGTACCAGATCAGCGTCCTGGGATATCAAACATCACGGAGGACCTGCTGAGTGAATCATTGTCCAAGGATTTCGAGGCCGTTTTGGCAGATGAATTTCAATCCTCTGGAGATTACATTGCCTACTTACATCACTGGCTTCTCCTTGATTTACTCAAGGACGTACTCGTTGATATGCGTGAGACACACTCCACCTATTTCCCAGTGCCCTTCTCATTCAATTGTAGAACTCGTCCAACTCCAAAAGGGAATCATCTTCTTCAGGAAGCATGGAAGGGAATTCACTCATGCTTGAGCTTAAGGCCGGAGCTGGATCAGTCACTGGATGATGTTGTAGGTAGAGACTTGGCAAAGGGTACCTGGGCAAACCTCCAACTGGAAACTGAGTGCATCACATTTGAGCTAGAGGACATCATTTTCGAAGAATTACTAGATGAGGTTATGTGTTCATGGGGCTGTCGATACTCTTAG 2538 0.4149 MGKHLVANHPKVHIDDNNPGCKWGPFQVLYYHHWRHVKKMFSHTKHHETKQGRYTRKKILFNHYCNVSQESEDAEAEVISAKSKSSKKNQDVFKKEDYECKMSSPPPGKQLHPFCQKHGLESSDNCLDCLSNFGNKADDSANQRHYFFLRKPPEELVAGDGKSRLFSTNAGDHLKDDQAAQSPVLTGEYDTKLFKYACRQELTGANKSTTDISSKMMEYSDVLEVIKSKKDMFLKILHDLDLNKKPSYCLQASNSSTKLMKSGSFPAAKSVVPDFKHLSISTLKHKQTEIWAFPKVEELYIASQTQEYVKPVDSPTDDIVAGSGLKGKTHKFSSGTSVGSNQQSWNQLVVHRFKTMKKKIKHALTEFKKDKDSKSNSAEAIKQKISTDEQEVVKPVIVNNEDCREYVDNCQESYETWDSNRCERKVSMVRRTASLKESLNRYTNLFEQSFGKDKKWQNSKSKSLKLTNEDKVRISRSTSMSYGRNLSLPDHIFLYEASYDSQNSLIPERISVDTDMKSGRLSFNADEQVDAVEETRLYNENVESRHSNNEDNAEISESGYDKHLELELTSSCQQANKETECTTDLYRGLIEQAQEAVILDDEHQDHITSFMEDSFTGCSSTAEPGCSVDDPKTQSIHSLPDSTCERTDDEVDKMQPADKYQLYHCLRPEFDLDGSSDFEYLEYILKCLGIVPDQRPGISNITEDLLSESLSKDFEAVLADEFQSSGDYIAYLHHWLLLDLLKDVLVDMRETHSTYFPVPFSFNCRTRPTPKGNHLLQEAWKGIHSCLSLRPELDQSLDDVVGRDLAKGTWANLQLETECITFELEDIIFEELLDEVMCSWGCRYS* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01803 845 PANTHER PROTEIN TRM32 1 839 IPR044257 -
Pte1g01803 845 Pfam Protein of unknown function (DUF3741) 209 239 IPR022212 -
Pte1g01803 845 Pfam Domain of unknown function (DUF4378) 677 835 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01803 Pte-Chr1 39357310 39362221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01803 221 829 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.039 1.81e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01803 - - qsa:O6P43_028234 430.639