Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01798 ATGGAGGCACGTGAAAATGCAGCTGCGGCCCTATTTAGCCTGTCAGTTGTAGATGAAAATAAGGTCACAATTGGTTCTTCCGGAGCAATTTCACCTCTAGTAATACTTCTAAGTGAAGATACCCAACGAGGTAAGAAGGAGGCTGCAACATCACTCTTCAACTTGTGCATCTACCAAGGTAATAAAGGAAAGGCAGTGAGAGCTGGTGATGTCTCAAGACAGATGCGTCTCCTAACAGAACCAAAAGGACGAATGGTAGACGCAGCATCGGCAATTCTAGCAGTACTATCTAGCCATCCAGAAGGGAAGACTGCTCTTGGAGGTGCGGAGGCTGTTCCGATTTTGGTTGAAGTTATAGGAAATGGATCTCCAGGGAACAAAGAGAATGAAGCAGCTGTATTGGTTCACCTTTGTTCAGCAGATACATGGTACTTAATTAAGAGTCCCATGAACTACGGGTGA 462 0.4524 MEARENAAAALFSLSVVDENKVTIGSSGAISPLVILLSEDTQRGKKEAATSLFNLCIYQGNKGKAVRAGDVSRQMRLLTEPKGRMVDAASAILAVLSSHPEGKTALGGAEAVPILVEVIGNGSPGNKENEAAVLVHLCSADTWYLIKSPMNYG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01798 153 Pfam Armadillo/beta-catenin-like repeat 18 56 IPR000225 GO:0005515
Pte1g01798 153 SUPERFAMILY ARM repeat 2 142 IPR016024 -
Pte1g01798 153 PANTHER U BOX DOMAIN-CONTAINING 2 141 - -
Pte1g01798 153 Gene3D - 1 62 IPR011989 -
Pte1g01798 153 Gene3D - 63 151 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01798 Pte-Chr1 39318554 39319844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01798 1 148 U-box Gene Family AT2G28830 70.946 1.21e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01798 - - aew:130774370 232.646