Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01797 ATGGCCGATCGAGCTCGGCAGGCTAAGATTCCACTGCCGGAGGCTGGTCTGAAGTGTCCAAGGTGTGAATCCACCAACACTAAGTTTTGCTACTTCAACAACTACAGTCTCTCTCAACCCCGCCACTTTTGCAAGACATGCCGGCGTTACTGGACAAGAGGCGGCGCTCTTAGAAACGTTCCAGTCGGAGGAGGGTGTCGAAGAAACAAGAACAGTAACAAAAATTGCTCTAAATCTCCAGCATTCAATGATGGACAGACCACTTCCAATGCCAATGGCACGGAGAACACTGCTTCTGGTATCTGTACTAGTGAGCTTATTTGTCCATTTCCACAACCAGATCTTATGGCATCTATACAAAAAATCAGCGACCCCTATGGAATTGGGAATATGGGGCTCAATTCAGGAGCTGATATCCAAGCACATAATGATCCATTGAGGTTTCATATGAGAAATACTTCGAGTGGCGGTATCAGCTCAAAAGCTTTATGTGGTGGAGTAGCAGACCAACGATGGAGTTTGAAGCAGTTCCCATTGATGACATCTACCTTCGAGTCAACTAGGTCTGTTGATTCGTATCCATTTCAAAGTGGATGTGTTGGAGAACCTTCTTCTTTGGCTTTGACTGGTGATAGCCCACTAGGTATTCATTCAGCATCATGTTCTGATATAACTAGGGTTATTACTGATCAATTACCCCCAGTTAAATATGACGATAACCAGGGTCTTAATTTGCAAAGATCATTATCTCGAGGTTTCTCAGAAAATAACTTTCAGTACTGGGGTCGTGGAAATTCAGCAACTTGGACAGAGATCAGCCCTTAA 825 0.4436 MADRARQAKIPLPEAGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKNSNKNCSKSPAFNDGQTTSNANGTENTASGICTSELICPFPQPDLMASIQKISDPYGIGNMGLNSGADIQAHNDPLRFHMRNTSSGGISSKALCGGVADQRWSLKQFPLMTSTFESTRSVDSYPFQSGCVGEPSSLALTGDSPLGIHSASCSDITRVITDQLPPVKYDDNQGLNLQRSLSRGFSENNFQYWGRGNSATWTEISP* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01797 274 Pfam Dof domain, zinc finger 17 71 IPR003851 GO:0003677|GO:0006355
Pte1g01797 274 ProSitePatterns Zinc finger Dof-type signature. 19 55 IPR003851 GO:0003677|GO:0006355
Pte1g01797 274 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 116 IPR045174 GO:0003700|GO:0006355
Pte1g01797 274 ProSiteProfiles Zinc finger Dof-type profile. 17 71 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01797 Pte-Chr1 39314692 39315516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01797 1 70 C2C2-Dof Transcription Factor Family AT2G37590 90.000 4.20e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte1g01797 zf-Dof 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01797 - - qsa:O6P43_028246 207.994