Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01792 ATGGCGAAGACTTTGATTTCGTCTTCACCATTCATTGGCACCGCATTTCCTTCTATTTCTCGCATTGGTGTTGGCCGTCGTGGTGTGGGTCTTCTACAAAACTTGCCTCACCGTAGTAATACTCATAGGCTTGTTGGCACCAGAGTTAGGTTCAGCTTACATGAAATTCCTTCAATTTCTTCCTTCGATTTCAATGAAATTGTTACCAGAGCTGAAGCTCTTCTATTTACCATAGCTGATGCTACTGTTGCTGCTGATTCGGCCACTACTGGTGCGGCAGCCTCCACCTCTACTGATGTTGCTGCACAGAAGAATGGAGGTTGGTTTGGTTTTATCTCTGACGCCATGGAAGTCGTGCTCAAGGTATTGAAGGATGGCCTTTCTGCTGTGCATGTACCCTATGCGTATGGATTTGCCATTATACTCCTCACTGTTGTTGTTAAATTAGCAACTCTTCCTTTGACAAAACAACAGGTGGAGTCAGCGATGGCCATGCAAAATCTTCAGCCTAAACTTAAAGCCATTCAAGAAAGATACGCCGGAAATCAGGAAAGAATACAGCTCGAGACAGCAAGGCTATATAGGCAAGCAGGGATTAACCCATTAGCAGGATGTTTGCCGACACTTGCTACAATTCCTGTTTGGATAGGCCTGTACCAAGCCCTTTCTAACGTGGCAAATGAGGGATTACTGACAGAAGGGTTCCTTTGGATCCCTTCTCTGGGTGGTCCAACTACAATAGCTGCTCGACAAAGTGGATCGGGAATTTCTTGGTTGTTGCCATTTGTGGATGGCCATCCACCACTGGGCTGGCAAGATACTGCGGCATACCTTGTTTTACCTGTTCTTCTTGTCATTTCTCAATATGTCTCAATGGAAATTATGAAACCCCCCCAGACTGATGATCCAACCCAAAAGAACACACTTCTTGTTTTCAAGTTTCTACCACTCATGATTGGATACTTCTCCTTATCTGTTCCATCAGGGTTGACAATATACTGGTTTACAAATAATGTCCTCACCACAGCACAACAAGTATGGTTGCGTAAGTTAGGAGGTGCAAAGCCTGTTGTAAACGAGACTGCAAGTGGCATTATTACAGCAGGACAGGCAAAACGATCAGATTCTCAGCCCGCAAGAGGGGGTGACAGGTTTAGGCAGTTGAAAGAGGAGGAGAAGAAGAAAAGGCTTAGCAATGCATTGCCATTGGAAGCTGTTCAAAATGTTGCTTCCGCATCTGATTCTGACGATGATTCAGATGAAGAGACACAAGATAAGGCAAGGGAAGCTTCAGACAAAGCATATGCTTCATCTGGTGCCAAAGAGGTTCCTGATTTTTCTCAGCAAAGAAGAAGCAAGAGATCAAAGCGTAAACGAACAGCTTGA 1386 0.4473 MAKTLISSSPFIGTAFPSISRIGVGRRGVGLLQNLPHRSNTHRLVGTRVRFSLHEIPSISSFDFNEIVTRAEALLFTIADATVAADSATTGAAASTSTDVAAQKNGGWFGFISDAMEVVLKVLKDGLSAVHVPYAYGFAIILLTVVVKLATLPLTKQQVESAMAMQNLQPKLKAIQERYAGNQERIQLETARLYRQAGINPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGSGISWLLPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMEIMKPPQTDDPTQKNTLLVFKFLPLMIGYFSLSVPSGLTIYWFTNNVLTTAQQVWLRKLGGAKPVVNETASGIITAGQAKRSDSQPARGGDRFRQLKEEEKKKRLSNALPLEAVQNVASASDSDDDSDEETQDKAREASDKAYASSGAKEVPDFSQQRRSKRSKRKRTA* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01792 461 Pfam 60Kd inner membrane protein 136 350 IPR028055 -
Pte1g01792 461 CDD 5TM_YidC_Alb3 137 350 IPR047196 -
Pte1g01792 461 MobiDBLite consensus disorder prediction 367 386 - -
Pte1g01792 461 MobiDBLite consensus disorder prediction 391 461 - -
Pte1g01792 461 PANTHER OXA1 79 396 IPR001708 GO:0016020|GO:0032977
Pte1g01792 461 NCBIfam membrane protein insertase YidC 136 349 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01792 Pte-Chr1 39281318 39286068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01792 18 448 Chloroplast and Mitochondria Gene Families AT2G28800 62.329 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01792 K03217 - vvi:100260431 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01792 1 39281318 39286068 Pte1g01792 1 39281318 39286068 RCT