Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01770 ATGTTAGATCTTAATCTCAATGTGCTGGGGACCGAGTCCACTCAGAATGATGATCCGGTTAGGTGCACTGATAAGTATCCTGAAGTTTCTTCCGGAAATCTACTAGATGAATCCGGAAATTCTAAGTCTTCTATCGTCAATGCTGACGGCTCTAGCAATGGAGGTGGTCGTGATGACTTCTGTTCTACACGCGCGGTAGGAGACTTCTGCACTTTCAACTTTGGTATCTTGAAGGTAGACACTGCAAAGGAAGTAGAGGCGACGAAGGAGTTCTCTGCAGTCAGTGGTAGTACGGAGATAATAAAGAGAGTGGACGGCGATTATGGAAATTCATCATCGAAGAAGTGCTGTATCGATCTCTCGTCCAATCTTGGTGTGGGTGGGACCGTTAATGGAGAGTTACGGACGTTGCAGGTTCAACGGCAACAGCAACCGCAGCAACAGAAAGTGAAGAAGAGCAGGAGGGGACCAAGGTCTCGTAGCTCGCAGTATAGAGGTGTGACCTTCTACAGGCGGACTGGAAGATGGGAATCGCACATCTGGGATTGCGGGAAACAAGTCTATTTAGGTGGGTTTGACACTGCTCATGTTGCTGCTAGAGCCTATGATCGAGCTGCCATTAGGTTCAGGGGAGTAGATGCCGACATCAATTTCGATCCGGGTGATTATGAGGAGGATATGAAACAGATGAATAATCTTACGAAAGAGGAATTTGTGTACACACTGCGACGCCGGAGAACTGGTTCCCCGAGCGGCAGTTCCAAGTATAGAGGAGTCACATTGCACAAATGCGGGAGATGGGAAGCTCGAATGGGCCAATTCCTTAGCAAAAAGACTTCTGACAAGACAGGCGTCAAATGCAATAGGAGGGAGGCGGTGACTAACTTCGTGGCAAGTAATTACAGGGAGGTGAAATCAGACAAATATAATGAAGGTAGCAAAGATAATCTCGACCTAAACCTGGGTATCTCTACCTCATCATTTGGAAGTGATCGTAAGAATAAAAGGAGTCAACTGCAATTCCAATCTGGCCCTTGCGACGTTCAGAGTGGAAAAAGTTCAAGGATGGAAAAGAGAATCAGGTCAGTGATAGTTGATCCGCGATTCAGAGGACTAGCAGCAAGAGAAGGACACTCTTCCATGTGGAATAGTGTTTATCCGGGTCTCTTTCCTAATGAGGAAAAAGCAAGGGAGAGAATTAGTATGGAGTATTCACAGGGACTACCAAACTGGTCTTGGCAAAAGCATGGGCAGGTCACTGTTGGCTCAGTGTCGCCAATCTCTACCGCAGCATCATCAGGATTCTCATTTACGGCCCCCTTTTCTTCAAGTTCTGTCCTTAAAGCGAAATCTGCTCAGGCAACAACTTACAATCTCTGTTTTGCTTCGTCAAATACAGCTGCCGCTGCCGCCTCTCAAAATTACTTAATGTTGAAACCGTCCCAAGCACCTACCTAA 1458 0.4671 MLDLNLNVLGTESTQNDDPVRCTDKYPEVSSGNLLDESGNSKSSIVNADGSSNGGGRDDFCSTRAVGDFCTFNFGILKVDTAKEVEATKEFSAVSGSTEIIKRVDGDYGNSSSKKCCIDLSSNLGVGGTVNGELRTLQVQRQQQPQQQKVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHVAARAYDRAAIRFRGVDADINFDPGDYEEDMKQMNNLTKEEFVYTLRRRRTGSPSGSSKYRGVTLHKCGRWEARMGQFLSKKTSDKTGVKCNRREAVTNFVASNYREVKSDKYNEGSKDNLDLNLGISTSSFGSDRKNKRSQLQFQSGPCDVQSGKSSRMEKRIRSVIVDPRFRGLAAREGHSSMWNSVYPGLFPNEEKARERISMEYSQGLPNWSWQKHGQVTVGSVSPISTAASSGFSFTAPFSSSSVLKAKSAQATTYNLCFASSNTAAAAASQNYLMLKPSQAPT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01770 485 MobiDBLite consensus disorder prediction 327 353 - -
Pte1g01770 485 Gene3D AP2/ERF domain 162 220 IPR036955 GO:0003700|GO:0006355
Pte1g01770 485 MobiDBLite consensus disorder prediction 33 51 - -
Pte1g01770 485 SUPERFAMILY DNA-binding domain 162 219 IPR016177 GO:0003677
Pte1g01770 485 MobiDBLite consensus disorder prediction 139 164 - -
Pte1g01770 485 MobiDBLite consensus disorder prediction 327 350 - -
Pte1g01770 485 MobiDBLite consensus disorder prediction 1 51 - -
Pte1g01770 485 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 133 342 - -
Pte1g01770 485 Pfam AP2 domain 163 211 IPR001471 GO:0003700|GO:0006355
Pte1g01770 485 ProSiteProfiles AP2/ERF domain profile. 163 219 IPR001471 GO:0003700|GO:0006355
Pte1g01770 485 CDD AP2 163 219 IPR001471 GO:0003700|GO:0006355
Pte1g01770 485 FunFam AP2-like ethylene-responsive transcription factor 162 220 - -
Pte1g01770 485 SMART rav1_2 255 303 IPR001471 GO:0003700|GO:0006355
Pte1g01770 485 SMART rav1_2 163 225 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01770 Pte-Chr1 39037434 39066266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01770 1 446 AP2-EREBP Transcription Factor Family AT5G60120 43.818 6.89e-88 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g01770 AP2 5.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01770 K09284 - qsa:O6P43_000276 474.552