Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01759 ATGCACGAACGCCTTCTTGCAATTAAGCAGTCAGAGAGTTGTAGTCCTGCTCATATTCCTGCCGATTTTTGTTGTCCTCTGTCTCTGGAACTGATGATAGATCCTGTTGTTGCGGCATCTGGGCAAACTGGGTTTAAGCCAGACATCACGGAGTCTTGGGCATGTGGAGTCTGGTGCTCTACTAGAGAAGTTGTTTTTGCTTCATCCAAGATCAATCAGTTGCTGGACACTACTCACTATTCTGTCGGTGCGCCTACTAAGAATTCGATATCTTCTGATGGAGCGAAACGGGAAGAAACATCACTGTTGCATCCTCAATCAAGTTCTGATGGTTTTTTGCCTGCTGAAAATGAACATGGTTTGGCTATCGCAAGATTATCACTGACAGAATCATATGACAGGCCTGCTAATACCGAAGAAAGTGTATTGGACATTAATTCCCATGTTTCATTCTTTCCATCTAGAAGGAAATCTACATCAGAAGAAAAGTCTCAATACCATATCAGGACTACGTCAGAGTCTAGCACTCTCCCTAATACAAACATTTCTCAAGGAACACAACTAGATGCTAATGACGCCTCACAGGTATCTTCCAATCTGACCGCTTATAGCAGTGATGCTTCTGCTAAGGTAAGTCCTCGACCAGATGCTACTTCTACCTTGACTGCCCCACAGAGAGAAACAGAATTCCCACCTCGGTTGATGGAGATCATATCTCAGAATCAAGCAATTTGGCGCAGATCTTCTGAGATTTATGCCAAGGATGGTTACGTTTTTTGTCCTGCATCTGAAACCAGACCAGATCTTTCTGCCATTGAAAACCAAGTCCAAAAATTGGTTGAGTTGAAAAGCTCTTCCCTAGATAAGCAAAAAGAAGCAACATCACAACTGCGGCTACTTGCTAAGCACAACATGGATATTCGTATTGTGATTACAAACTCTGGGCCATCAGTTTGCACAGAGGAAGATGAAGACACAGAGGTACTCCGAGAGAAGTAG 999 0.4334 MHERLLAIKQSESCSPAHIPADFCCPLSLELMIDPVVAASGQTGFKPDITESWACGVWCSTREVVFASSKINQLLDTTHYSVGAPTKNSISSDGAKREETSLLHPQSSSDGFLPAENEHGLAIARLSLTESYDRPANTEESVLDINSHVSFFPSRRKSTSEEKSQYHIRTTSESSTLPNTNISQGTQLDANDASQVSSNLTAYSSDASAKVSPRPDATSTLTAPQRETEFPPRLMEIISQNQAIWRRSSEIYAKDGYVFCPASETRPDLSAIENQVQKLVELKSSSLDKQKEATSQLRLLAKHNMDIRIVITNSGPSVCTEEDEDTEVLREK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01759 332 PANTHER U BOX DOMAIN-CONTAINING 14 315 - -
Pte1g01759 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 58 IPR013083 -
Pte1g01759 332 ProSiteProfiles U-box domain profile. 18 43 IPR003613 GO:0004842|GO:0016567
Pte1g01759 332 SUPERFAMILY RING/U-box 6 51 - -
Pte1g01759 332 MobiDBLite consensus disorder prediction 82 114 - -
Pte1g01759 332 MobiDBLite consensus disorder prediction 204 226 - -
Pte1g01759 332 MobiDBLite consensus disorder prediction 204 228 - -
Pte1g01759 332 MobiDBLite consensus disorder prediction 169 190 - -
Pte1g01759 332 Pfam U-box domain 19 44 IPR003613 GO:0004842|GO:0016567
Pte1g01759 332 MobiDBLite consensus disorder prediction 153 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01759 Pte-Chr1 38917526 38918673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01759 1 322 U-box Gene Family AT2G23140 36.979 9.14e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01759 - - qsa:O6P43_024581 267.314