Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01751 ATGGAAATTGATCTGAACCATGCAGTGAGTGAGGTTGAAAAGAATGTAGCTTGCAATGAGGACTGTGAGAGGGGGGACTGTGTTTATAGTTTGTCATCATCAACTAATCGTTCAAACTCATCCTCAGCTCAAATTTCTTCATATCTGGAGCTCTGGCATGCTTGTGCTGGCCCTCTCACCTCACTGCCTAAGAAAGGGAATGTAGTGGTCTACTTCCCACAAGGGCACTTGGAACAGCTTGTTTCTTTTTCTCCACTCTCACTCAGGGAGATGTCCACATATGATCTCCAACCACAGATCTTTTGCAAAGTGGTTAATGTCGACCTACTTGCTAATAAAGAGAATGATGAGGTTTATACGCAAGTGAGTTTGCTTGCTCAGCCTGAGTTGCAAGGTACAAATTTAAAGGGAAATGAGCTTGCCGAGTTGGGACTAGATGACGAGGATGATGGAGGATCGCCTACAAAATCAAGTTCAACTCCTCATATGTTTTGCAAAACTCTCACAGCCTCTGACACCAGTACTCATGGGGGATTTTCTGTTCCTCGCAGAGCTGCTGAAGATTGTTTTCCACATCTGGATTATAAGCTGCAGAGACCCTCCCAAGAGTTGGTTGCCAAGGACCTACATGGAACTGAATGGAGGTTTCGTCATATTTATAGGGGTCAACCAAGGCGTCACCTGCTGACTACAGGATGGAGTATTTTTGTTAGCCAAAAGAATCTTGTTTCTGGGGATGCAGTGCTGTTTCTGAGGGGAGAAAGTGGAGAGTTGAGGTTGGGTATCAGGAGATCTATTCGACCAAGAAATTGTCTTCCTGAGTCTGTTGTCCGCAATCAAAGTTCCTACACCAGCGCCCTTTCATCTGTGGCCAGTGCAATAGCCAATAGAAGTGTTTTTCATGTCTTTTATGCTCCAAGAGCAAGTCATGCAGAGTTTGTTGTGCCCTACCAGAAATATATCAAAAGCATTAGTAATCCAGTGACCATGGGAGTGAGATTCAAAATGAGATTTGAAAATGAAGAATCTTCTGAGGGAAGGTGCAGTAGCGGCATAGTGAGAGGAATAAGTGATTCTGATCATCACAGATGGCCTAATTCCAAATGGAGGTGCTTGATGGTTAGATGGGATGACGACACTGCAATTAGTCATAAGGAGCGAGTTTCCCCCTGGGAGATTGATTTTTCTGGCTCTCTGCCTCCATTGAGCATTCAGTCTTCTCCAAGACTGAAAAAACCGCGGACAGGATTTCAGCCAATCACACCCAGAAACCTCATCACTGCAGGTGGTGGGTTTATGGACTTTGAGGAGTCTGTAAGATCCTCCAAGGTCTTGCAAGGTCAAGAAAACATAGGTTTATTGTCACCCTATTATGGTGTTGATACAATAAACCGACAATCCAAGTTTGAAACACCTTCAACTCATCAAAATGTTGCATCAACTGGGATGAGGGAGGTTACCATTGAAGAGTTCTCAAGGATTCATCCCTCCACATATGCAGGCTTTGCGGAAACAGTTAGAATTCCGAGGGTCTTGCAAGGTCAAGAAATATTCCCATGGAGATTCCTTTCGGACTCGAATAATTTCAATAGAGGTGCTTGCAGCAAACAGAATTTTGGTGGCGCAACTTTCAATATGCATCAAGCACCACAGCCTGCATTTCAACCTACATCAGCAGAAATCCTTCAAAGTATGTGCGTTTCTTACAGAGACATTCACAAAGTTAGTAACCAAAGTGTGTCCTCCATCACTGATTTGCAGAGAGAAAATGACTCTTCCAACCACAGTACTAATCCAGCAGAAATCACGAGGACTGAAGTTGACCAAAAGCATCCTGATGAGCAGGAGCTGCAGGAAGAAGGTTCTGCTAATCCTTCTCTAGGACTAAACTTGAGAATTCCAAACAAGGAGAGTTTCAATGCAAAGATGAACGGATGCAGACTTTTTGGGATTTCTTTGACTGAGAATACGTCCAATCTGCAAAACCCCACCAGAAGGAGCTGTACTAAGGTTCACAAACAAGGCAGTTTGGTTGGAAGAGCCATTGATCTCTCAAGAATTAATCGCTATGGGGATTTGTTTATTGAGCTGGAGCGATTGTTTGGTATGGAAGGCCTTCTGCAGAGTCCTGATGCTGGATGGCGGATCTTGTATACTGACAGTGAAAATGATATAATGGTTGTTGGAGACGAACCCTGGCATGAGTTCTGCAAAGTGGTCTCCAAAATCCACATATACACACAAGAAGAAGTGGAGAAGATGACCATTGGAATAATCAGTGATGATACTCAAAGCTGTTTGGAGCAGTCACCGGTTACCATGGAAGCATCCAAGTCTTCCTCGGTGGGACAGCCCGACTCTTCTCCTACTGTGGTTAGGGTCTAA 2385 0.4415 MEIDLNHAVSEVEKNVACNEDCERGDCVYSLSSSTNRSNSSSAQISSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQLVSFSPLSLREMSTYDLQPQIFCKVVNVDLLANKENDEVYTQVSLLAQPELQGTNLKGNELAELGLDDEDDGGSPTKSSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPHLDYKLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGESGELRLGIRRSIRPRNCLPESVVRNQSSYTSALSSVASAIANRSVFHVFYAPRASHAEFVVPYQKYIKSISNPVTMGVRFKMRFENEESSEGRCSSGIVRGISDSDHHRWPNSKWRCLMVRWDDDTAISHKERVSPWEIDFSGSLPPLSIQSSPRLKKPRTGFQPITPRNLITAGGGFMDFEESVRSSKVLQGQENIGLLSPYYGVDTINRQSKFETPSTHQNVASTGMREVTIEEFSRIHPSTYAGFAETVRIPRVLQGQEIFPWRFLSDSNNFNRGACSKQNFGGATFNMHQAPQPAFQPTSAEILQSMCVSYRDIHKVSNQSVSSITDLQRENDSSNHSTNPAEITRTEVDQKHPDEQELQEEGSANPSLGLNLRIPNKESFNAKMNGCRLFGISLTENTSNLQNPTRRSCTKVHKQGSLVGRAIDLSRINRYGDLFIELERLFGMEGLLQSPDAGWRILYTDSENDIMVVGDEPWHEFCKVVSKIHIYTQEEVEKMTIGIISDDTQSCLEQSPVTMEASKSSSVGQPDSSPTVVRV* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01751 794 Gene3D - 662 755 - -
Pte1g01751 794 FunFam Auxin response factor 162 266 - -
Pte1g01751 794 SUPERFAMILY DNA-binding pseudobarrel domain 156 281 IPR015300 -
Pte1g01751 794 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 47 755 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte1g01751 794 MobiDBLite consensus disorder prediction 604 618 - -
Pte1g01751 794 FunFam Auxin response factor 661 755 - -
Pte1g01751 794 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Pte1g01751 794 CDD B3_DNA 162 264 IPR003340 GO:0003677
Pte1g01751 794 FunFam Auxin response factor 327 400 - -
Pte1g01751 794 Pfam AUX/IAA family 664 750 IPR033389 -
Pte1g01751 794 SUPERFAMILY CAD & PB1 domains 667 745 - -
Pte1g01751 794 Gene3D - 328 400 - -
Pte1g01751 794 SMART B3_2 164 266 IPR003340 GO:0003677
Pte1g01751 794 Gene3D - 162 266 IPR015300 -
Pte1g01751 794 ProSiteProfiles PB1 domain profile. 666 750 IPR000270 GO:0005515
Pte1g01751 794 MobiDBLite consensus disorder prediction 769 794 - -
Pte1g01751 794 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
Pte1g01751 794 MobiDBLite consensus disorder prediction 580 603 - -
Pte1g01751 794 MobiDBLite consensus disorder prediction 580 630 - -
Pte1g01751 794 MobiDBLite consensus disorder prediction 143 162 - -
Pte1g01751 794 Pfam Auxin response factor 291 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01751 Pte-Chr1 38880060 38885566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01751 46 795 B3 DNA Binding Superfamily AT5G60450 56.881 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte1g01751 AUX_IAA 3.5e-05 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01751 - - qsu:112032972 1072.38