Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01749 ATGGAAGAAATATTCAAGGACCGTATTCAAGGGGATCTCATTAACCCAGCGGGATGGCTACCATGGACTGCAACTGCTAAGAGGGTACACGGGTTCACACTTGACACACTTTATTTTGCAGAGTACAATAACGTAGGTCCAGGAGCTGCAACTGCTAAGAGGGTACACTGGAAGGGATATAAAGTCATCAAGAACAAGAATGAGGCACATAAATTCATAGCTGGTCCAGTCACTTTGCAATGCATGCGGCATCAGGCGACGAAAGCAAAGAAAAGTTATGGTCGAAGTTGA 291 0.4502 MEEIFKDRIQGDLINPAGWLPWTATAKRVHGFTLDTLYFAEYNNVGPGAATAKRVHWKGYKVIKNKNEAHKFIAGPVTLQCMRHQATKAKKSYGRS* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01749 96 PANTHER PECTINESTERASE 11 77 - -
Pte1g01749 96 Pfam Pectinesterase 11 75 IPR000070 GO:0030599|GO:0042545
Pte1g01749 96 Gene3D - 3 92 IPR012334 -
Pte1g01749 96 SUPERFAMILY Pectin lyase-like 11 77 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01749 Pte-Chr1 38865696 38866441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01749 14 72 Carbohydrate Esterase AT1G11580 55.932 1.66e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01749 K01051 - qsa:O6P43_021935 92.0485