Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01743 ATGGCTTCCACCAAAAAATCGAAACCAGAAAACAAACGCAAAAATGTCGAAAGCGCGAAGTCTGAAAGCAAGGGCAGTCGTAAGCTGAAGGAGACGAAGAAGCAGACTACCAAAGACAAGAGCAAGAGGAACAAGGAGAAAGAGAAGAAGCACATGCAGAGCAACAAACGTAAGATGATTGCTAATGGTGTTGTTGTGGTTCCTATTTCCTCGAGCGCCGAATCTGGAGAAGAAAACACGTCTGAGCTCGAAGAAGTAGCTGTGGACAATAAGGTTACAGCTTCAAATGGAAGAGCCAACAATGCGAAATCCAGGGCAAGTAAAGGAAAGAAAAGAAACAATGGAAAAGAAAAAGAAGAAGAAGAGGAAAGGGACAAAGAGAGAGACACTATTGCGTTTCCGATGAATCGAATCCGGACCATTGTTAAGGGTCAGGGTTCTGAACTGTGGGTGTCAAATGAAGCTGTCTTCGCCATCAAGAAGGCTACGGAGAAGTTCCTCGAACGATTTACAGAAGATGCTTATGCTAGCTGTGTCGAAGATCGGAAGAAATCACTTGCATACAAACACTTGGCTTCAGTGGTTAGCAAGCAGAAGAAATATGACTTCCTTTCTGATTTTGTTCCTGAGCAAGTAATGGCTGATGATGCCCTGAGAGAGAGAAATTCAGCTGAACAAACGGCTATATAG 690 0.4362 MASTKKSKPENKRKNVESAKSESKGSRKLKETKKQTTKDKSKRNKEKEKKHMQSNKRKMIANGVVVVPISSSAESGEENTSELEEVAVDNKVTASNGRANNAKSRASKGKKRNNGKEKEEEEERDKERDTIAFPMNRIRTIVKGQGSELWVSNEAVFAIKKATEKFLERFTEDAYASCVEDRKKSLAYKHLASVVSKQKKYDFLSDFVPEQVMADDALRERNSAEQTAI* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01743 229 Gene3D Histone, subunit A 92 210 IPR009072 GO:0046982
Pte1g01743 229 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 132 195 IPR003958 -
Pte1g01743 229 SUPERFAMILY Histone-fold 97 204 IPR009072 GO:0046982
Pte1g01743 229 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 96 225 - -
Pte1g01743 229 Coils Coil 214 229 - -
Pte1g01743 229 MobiDBLite consensus disorder prediction 1 128 - -
Pte1g01743 229 MobiDBLite consensus disorder prediction 112 128 - -
Pte1g01743 229 MobiDBLite consensus disorder prediction 6 48 - -
Pte1g01743 229 Coils Coil 42 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01743 98 194 CCAAT-HAP5 Transcription Factor Family AT1G07980 41.509 9.65e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pte1g01743 CBFD_NFYB_HMF 6.6e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01743 - - pvy:116144588 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01743 1 38838692 38840108 Pte1g01743 1 38838692 38840108 RCT