Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01719 ATGAGCGTCAGAAGCTTCTCAGCCGACCAACACAAAATGGTGATGATGTCTGAAACAAATGTCAAGTCCTCCAAGAAAATTAGGTTGCTTCCTAGGAAAGCCAAGAAAGATCGTCATACCAAGGTGAACGGTCGAGACCGCCGTGTCCGATTACCACCTTTATGTGCTGCACGTATCTTTCAACTCACCCGTGAGCTCGGCTACAAAACAGTAGGTGAGACCATTAATTGGTTGCTGCAGAAGGCAGAGCCGGCCATTTTCGCAGCCACTGGTAATGGCGTATCTGCTTCTGGCACCACCAGCAGTACCGTTGGTTCCTCGAATACCTCACACGGTCCGATCGAGCTTCACGAGGCCACTAGTTTTGTTCATGGCAATAAAAATTTAGTCAACGAGTACAGTGGGAGTACGGGGGCTGAGTTTCAGCCATTGCCACAGCAACCACCTTTTGATTTTGATCTAACTTTACCCTCTGATATGTACTTTTATGCTAATGACTTTGGAATGCTGCAGTCTCTGGAGTGA 525 0.4762 MSVRSFSADQHKMVMMSETNVKSSKKIRLLPRKAKKDRHTKVNGRDRRVRLPPLCAARIFQLTRELGYKTVGETINWLLQKAEPAIFAATGNGVSASGTTSSTVGSSNTSHGPIELHEATSFVHGNKNLVNEYSGSTGAEFQPLPQQPPFDFDLTLPSDMYFYANDFGMLQSLE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01719 174 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
Pte1g01719 174 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 123 IPR005333 GO:0003700
Pte1g01719 174 Pfam TCP family transcription factor 34 110 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01719 Pte-Chr1 38643117 38643766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01719 18 94 TCP Transcription Factor Family AT3G27010 66.667 5.21e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte1g01719 TCP 5.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01719 - K16221 tcc:18590926 118.242