Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01717 ATGTTTGTCTTTGTTTTCATTCTGCTTTATGTAATACGCTTTGAAGTCATTTGTTTTCTCTCTAGTTACAGCTTCAAGGGGGAAATGGGCAAGAAAAAAGATCTTAAGTCAAGCAAAGATAAAAATAAGGAGGGTGTAACTGGTTTGTTGGAAAATGAGGGTGTTAAAAATGATTGTTTGGAAGATGTGGAACTGAATTCCAATCAGAGTGTTAATGTTGAATTTAAGGATGGGCATAAAGAAAGGAAGAATAAGAGGAAGGTAGTTGAGGTTAATGATATTAATGAGGAATGCCTGAAAGGTAAGGAGATGCAAAGAAGAAGTGAGGGTAATGACAAGAAAGTAATCTCACAGGAAGCAGGTGTTGGAGAAGAACACAATCTGGAGCGGAGAGTCAGTGGTCAGAATGGGAGCAACTCTGGGAACAAGAAAAAGAAGAAGTATGCAAAGGAGAAGGAAGATGCTGTAGACGTAGTCTGGAATGAAGGAGTGAACTCTGAAATGAATGGCGAGATGGAAGATGATAGGAAGGTTAAGATAAGAAAGAGAAAGAGAGAAAAGATCAATGATGATGTTGTGTGTGATGATTTTAGTGATGAAAAAGAAAGGCATTCTCCTGGTATTGAAAAAGAAAGCAAGGTCAAGGAGAAAAATCATAAATGTGATTTATTTACTGGAAATGAGAATGAAAGTTATGGCACTCAATGCAAGGAAAGCAAAAGAGTAAGTGGCATTGTTTCTGAAGGTAACAAGCAAGTTGCAGACACAGATATGGGTGAAGATGGCAAGAAGATGAAGATAAAGAAGATCCAGGCTGGCATTAAGCTTGGTTCTGAAGGAAGAAATGGCTGCGATACCATGGAAACTAGATTGGATATGGAGGCCAGTGTCTGCATTCCATATGTTACACCTGAAGGACGTTATAAGCAAGATGTTGCGAACTCTGAAATGCATAAAAATGGCAAGATAAAAAAGAAAAAGAAGAAGAAAAGCAAGATTGAACTGGCAGAGGTAGAGGCAGATGAACACCTCCCAGAAGGAAAAGAGTGTATTGAAGAGCTTAAAGCTGAAGGCAAGTCCATGCAAGTTGTTGAAAGCTCAAAACTGGGTGGAAATGACAAGATGATCAAGAGTAAGAAGAGCAAAACGATAAAGGTGAATAAACTTGTGTCAGAAGGTAAAGAATGCAATGAGGTATCCCAATATGGAAAAGTTATTGAGACCAGCAACCATTCGTCCAAACTTAAGTCTAAAAAAAATTCTAAAAGAGTAAGTTTTTCTGATGAGGTCGAGGTTCTAGATTTAGTACGAGGAAAGAGATTTACAAAAGAAGAAGATGAGAAGATCATAGATTCTGTTCACTCATATATACGATCACATGGACTAGGTGATGATGGAGTGAAGATGATTCTTAATTGTAGATCGTATCCTGAAGTTAAAAACTGTTGGAAAGAAATTGGGGCAGTCTTGCCTCGTAGGCCCCGGCAGAGTGTATATTATCGCGCTCATTCATTGTTGGAGAGGGCTGAGGAGCGGAAATGGACCACTGATGAGCGTGAACTTATTCGAAGGTTTTACGACAAGCATGGTGCTGATTGGAAGATGCTGGCTGATGCACTTGGCAAACATAGGAAACATGTAAAGGATTGTTGGCGGAGGATTAAATTTGATAGTAAGGCAAGAGGTTGGTCTCAGGAGGAGTATCAGACTTTATTTGATTTGGTGAATCAAGATTTACGTATGAGGGCTCTTGAGGAAAATAGGAAAAGCAAACATGGGATGTTGAGGGATAACATTCCGTGGGAGTCAATAAGTGAAATATTGACCAGAACCATGACATATTGCTGCCGTAAATGGTATGAACAATTAACATCACCGATGGTGGTTGAAGGTATTTGGTCTGATACTGATGACTACCGCCTAGTAAGTGCTTTATATGAATTGGATGCCTGTTCTATGGAAGAAGTGGAGTGGGATTTCTTGCTTGAGCACAGGACTGGTGATATCTGCAGAAAAAGATGGCACCAAATGGTTCGACACATTGGTGATCCCGGGAATAAGTCTTTTGCTGAACAGGTTGAAATTCTCTCAGAAAGATATTGCCCTTACTTAGTCGAAGAAAGAGAGGCCTTTGATAGCAAGCCTGTGGTGGACTGA 2157 0.3968 MFVFVFILLYVIRFEVICFLSSYSFKGEMGKKKDLKSSKDKNKEGVTGLLENEGVKNDCLEDVELNSNQSVNVEFKDGHKERKNKRKVVEVNDINEECLKGKEMQRRSEGNDKKVISQEAGVGEEHNLERRVSGQNGSNSGNKKKKKYAKEKEDAVDVVWNEGVNSEMNGEMEDDRKVKIRKRKREKINDDVVCDDFSDEKERHSPGIEKESKVKEKNHKCDLFTGNENESYGTQCKESKRVSGIVSEGNKQVADTDMGEDGKKMKIKKIQAGIKLGSEGRNGCDTMETRLDMEASVCIPYVTPEGRYKQDVANSEMHKNGKIKKKKKKKSKIELAEVEADEHLPEGKECIEELKAEGKSMQVVESSKLGGNDKMIKSKKSKTIKVNKLVSEGKECNEVSQYGKVIETSNHSSKLKSKKNSKRVSFSDEVEVLDLVRGKRFTKEEDEKIIDSVHSYIRSHGLGDDGVKMILNCRSYPEVKNCWKEIGAVLPRRPRQSVYYRAHSLLERAEERKWTTDERELIRRFYDKHGADWKMLADALGKHRKHVKDCWRRIKFDSKARGWSQEEYQTLFDLVNQDLRMRALEENRKSKHGMLRDNIPWESISEILTRTMTYCCRKWYEQLTSPMVVEGIWSDTDDYRLVSALYELDACSMEEVEWDFLLEHRTGDICRKRWHQMVRHIGDPGNKSFAEQVEILSERYCPYLVEEREAFDSKPVVD* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01717 718 MobiDBLite consensus disorder prediction 102 131 - -
Pte1g01717 718 PANTHER GB|AAC33480.1 76 717 - -
Pte1g01717 718 MobiDBLite consensus disorder prediction 102 152 - -
Pte1g01717 718 SUPERFAMILY Homeodomain-like 609 681 IPR009057 -
Pte1g01717 718 Pfam Myb-like DNA-binding domain 514 571 - -
Pte1g01717 718 ProSiteProfiles Myb-like domain profile. 506 555 IPR001005 -
Pte1g01717 718 ProSiteProfiles Myb-like domain profile. 625 678 IPR001005 -
Pte1g01717 718 ProSiteProfiles Myb-like domain profile. 563 623 IPR001005 -
Pte1g01717 718 Gene3D - 515 554 - -
Pte1g01717 718 Gene3D - 555 627 - -
Pte1g01717 718 SUPERFAMILY Homeodomain-like 486 553 IPR009057 -
Pte1g01717 718 SMART sant 510 557 IPR001005 -
Pte1g01717 718 SMART sant 629 680 IPR001005 -
Pte1g01717 718 SMART sant 437 508 IPR001005 -
Pte1g01717 718 SMART sant 559 625 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01717 Pte-Chr1 38636748 38639276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01717 483 680 MYB-Related Transcription Factor Family AT3G18100 25.490 8.36e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01717 - - mesc:110626441 444.891