Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01706 ATGGCGAAACTGAGAAGCAATGGCAAGAAAATGGTTGGGATTGTAAACTTCAAAATTGTTGTCCAAAAGCTACAGAAGAGTCTATCTTTACACAAAAAATCATGTTCTAGAAGTTATGGTGATGATCTATGTGAGGAAGTTTATCACTCAACCCCAGTCCCTGAGGACATTAAGGAAGGGCATTTTGCTGTGATTGCTGAAGACGGGAAAAGGTTGAAAAGGTTTGTGGTTCCATTGAGCTGCTTAACACACCCTCAGTTCCTTAGGCTGCTGGAGCAAGCAGCTGAAGAGTATGGGTTTGATCAAGGAGGTGCATTAACCATACCATGCAGGCCTAGTGAGCTTGAGAAGTTTCTAGCTGAGCAATGGCAGGAAGATCAGTCGCCAAGAGTTGGGGTCAGTTGGAATTCTTGTCAGGCCATGGTAGAAAAGCATCGACTATAG 444 0.4392 MAKLRSNGKKMVGIVNFKIVVQKLQKSLSLHKKSCSRSYGDDLCEEVYHSTPVPEDIKEGHFAVIAEDGKRLKRFVVPLSCLTHPQFLRLLEQAAEEYGFDQGGALTIPCRPSELEKFLAEQWQEDQSPRVGVSWNSCQAMVEKHRL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01706 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 118 IPR003676 GO:0009733
Pte1g01706 147 Pfam Auxin responsive protein 38 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01706 Pte-Chr1 38537999 38538604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01706 27 118 Calmodulin-binding Proteins AT5G20810 44.565 1.85e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01706 K14488 - vvi:100267173 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01706 1 38537999 38538604 Pte1g01706 1 38537999 38538604 RCT