Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01702 ATGGAGAAATCTGGTTATGGCCGTGACGGTGTCTACAGGTCTCTAAGACCAACACTCGTGCTACCTGAAGATCCAAACCTCTCCATGGCTTCATTTATCTTCAGAAATTCTTCATCTTATCCACAAAAACCCGCTCTCATTGACGCCGATTCCGCTCAAGTCTTTTCCTTTTCGCAATTCAAATCCACTGTAGCAAAGGTGTCTCACGCTCTTCTCCATCTGGGTGTGAGGAAGAATGATGTTGTTCTCATTTTTGCACCCAATTCTGCTCAGTACCCAATATGCTTCATCAGCATTGTTGCCATTGGCGCCATCGCCACAACGGCCAACCCAGTTTACACTGTTGGGGAGCTCTCCAAGCAAGTGAAGGACTCGAATCCTAAGCTTGTAATGACGGTCCCTGAATTGTGGGACAAGGTTAAGGGATTTAACCTTCCTGCTGTAATTTTGGGTCCCAAAAGTAATTCCTCGCAAGTAATGTCCAAATCAAGAATCACGAGTTTTGATCATTTGGTTGAGTTAGGTGGGTCAGCTACTGAGCTTCCCCTGTCTAACATTAAGCAGACTGACACGGCTGCGCTTTTGTACTCGTCCGGCACCACTGGTACAAGCAAAGGTGTGGTTCTTACACACAGGAATTTCATTGCAACGTCTCTCATGATAACCATGGATGATGAACTAGCTAGAGTTATGCACTCTGTGTATCTCTGCGTGTTGCCAATGTTTCACGTTTTTGGGCTTGCTCTCATAATGTATTCGCAGCTTCAGAGGGGCAATACGGTGGTGTCCATGAAAAAGTTTGACCTTGAGATGATTCTAAAGACGATTGAGAAGTATGGGGTCACACATCTATGGGTTGTACCACCGATTGTACTAGGTCTGGCAAAGCACAGTATTGTGAAGAAGTATCATCTCTCATCTCTAAAGCAGGTTGGTTCAGGTGCAGCACCTTTGGGGAAAGAGTTGATGGAAGAATGTGCAAGGACTATTCCCAAAGCTGTGGTTATTCAGGGCTATGGCATGACAGAAACTTGTGGTGTTGTTTCTGTGGAAAATCCAAGGGTAGGACCTCGTCATACTGGTTCTGCTGGATCACTCATACCAGGAGTTGAGGCTCAAATAGTAAGTGTTGATAAACTGAACCCTCTCCCTCCCAATCAACTTGGGGAGATATGGGTGCGTGGGCCTAACATGATGCAAGGTTATTTTAACAATCCTCAGGCCACCAAGTCGACTATAGACAAAAGAGGTTGGGTACATACAGGAGATCTGGGATATTTTGATGAAAATGGATACCTTTATGTAGTAGATAGAATCAAAGAACTCATCAAGTACAAAGGACTTCAGGTTGCACCGGCAGAGCTTGAAGGTCTACTTATTTCTCACCCAGAAATACTAGATGCTGTTGTTATCCCTTTTCCTGATGCCGATGCTGGTGAGGTCCCCGTGGGCTATGTGGTTCGCTCCCACAACAGTTCACTGACTGAAGAAGATGTCAAGAAGTTCATTGCTGACCAAGTGGCACCTTTCAAAAGACTCCGGAAGGTGACATTTATACAGAGTGTGCCCAAATCAGCTGCAGGAAAAATTCTCAGGAGAGAGCTCATTGAAAAAGTTAGATCAAAATTCTAA 1632 0.4491 MEKSGYGRDGVYRSLRPTLVLPEDPNLSMASFIFRNSSSYPQKPALIDADSAQVFSFSQFKSTVAKVSHALLHLGVRKNDVVLIFAPNSAQYPICFISIVAIGAIATTANPVYTVGELSKQVKDSNPKLVMTVPELWDKVKGFNLPAVILGPKSNSSQVMSKSRITSFDHLVELGGSATELPLSNIKQTDTAALLYSSGTTGTSKGVVLTHRNFIATSLMITMDDELARVMHSVYLCVLPMFHVFGLALIMYSQLQRGNTVVSMKKFDLEMILKTIEKYGVTHLWVVPPIVLGLAKHSIVKKYHLSSLKQVGSGAAPLGKELMEECARTIPKAVVIQGYGMTETCGVVSVENPRVGPRHTGSAGSLIPGVEAQIVSVDKLNPLPPNQLGEIWVRGPNMMQGYFNNPQATKSTIDKRGWVHTGDLGYFDENGYLYVVDRIKELIKYKGLQVAPAELEGLLISHPEILDAVVIPFPDADAGEVPVGYVVRSHNSSLTEEDVKKFIADQVAPFKRLRKVTFIQSVPKSAAGKILRRELIEKVRSKF* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01702 543 FunFam 4-coumarate--CoA ligase 2 441 542 - -
Pte1g01702 543 SUPERFAMILY Acetyl-CoA synthetase-like 21 541 - -
Pte1g01702 543 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Pte1g01702 543 CDD 4CL 21 535 - -
Pte1g01702 543 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Pte1g01702 543 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 440 - -
Pte1g01702 543 Gene3D - 10 440 IPR042099 -
Pte1g01702 543 Pfam AMP-binding enzyme 35 445 IPR000873 -
Pte1g01702 543 Gene3D - 441 542 IPR045851 -
Pte1g01702 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01702 Pte-Chr1 38519295 38522785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01702 1 544 Monolignol Biosynthesis Gene Families AT4G05160 69.597 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01702 K01904 - qsa:O6P43_000369 882.863