Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01690 ATGGACATGGAAGAATTTGTGGGGTCGTCTAGCAACGAAGTCAGCCAAATTGCCAAAGGCAAGCGTAGCAAGAGGCGAAGGCTGTCAACCCCTAATTGTGGCAACAGTACCGTGATGACATGTAGCTCATCGAGTACAGCTTCTGGAGGTCTTGTTCATGGTGGTGAATATGGTAATTCCTTTTCGTCAACACCATCCTGCAGCTACGGGAGCACTGAAGATGAGGAAGACATGGCGAACTGTTTGATTCTCTTAGCTCAAGGAAATTCTGCAAAGCAGGTTAAAGATGGTGGTAAGAAGACAGATAAGTTCAGCAGCAGAAAATTGGCTCACATAGCCACATCGAATACTGCTTTTAAGACTGGTTTCGTTGTGTACGAGTGCAAAACATGTAACCGTGCTTTTCCTTCATTTCAAGCACTAGGAGGACACAGAGCGAGTCACAAAAAGCCCAAGGTCACGGCGGTGGAGAACAAGTCATCCCCTTCTTCACCACCGTCAGTACCAGCACCGCCGCTGCAGCCTAGTGATGATGATCATGAATTGGAATTAGAAGGTGGGGAAAGCCATGTCAAAAGTAATATGACCCTTCCTCCTGTTCATCATCATCATCAAGTTCCTGCTCAGTTGTCCTTGTCTGCCATCAGAGGAATGAATCAGAACAAGGCAAAAATTCACGAGTGTTCGATATGTGGATCAGAGTTTTCATCTGGGCAAGCCTTGGGTGGACACATGAGGCGTCACAGGGCTGCAACAAGCAGTGGTCAAATGGTAGGCTTGAACATCAGTCATGTCAACGATACTGCCACTATGAATCACATGGACATCAAGTCAAGAAACAACATTCTAGAATTGGATCTAAACCTTCCGGCGCCGGAAGAAGATAACAGGGATTCCTCTTCCAAGTTTCAGTATGCTCCAACTCAACGATCACTGGTGCTCTCTGCTCCTGCTTTGGTTGATTGCCATTATTGA 975 0.4646 MDMEEFVGSSSNEVSQIAKGKRSKRRRLSTPNCGNSTVMTCSSSSTASGGLVHGGEYGNSFSSTPSCSYGSTEDEEDMANCLILLAQGNSAKQVKDGGKKTDKFSSRKLAHIATSNTAFKTGFVVYECKTCNRAFPSFQALGGHRASHKKPKVTAVENKSSPSSPPSVPAPPLQPSDDDHELELEGGESHVKSNMTLPPVHHHHQVPAQLSLSAIRGMNQNKAKIHECSICGSEFSSGQALGGHMRRHRAATSSGQMVGLNISHVNDTATMNHMDIKSRNNILELDLNLPAPEEDNRDSSSKFQYAPTQRSLVLSAPALVDCHY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01690 324 MobiDBLite consensus disorder prediction 1 31 - -
Pte1g01690 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 126 153 IPR013087 -
Pte1g01690 324 PANTHER ZINC FINGER PROTEIN ZAT5 62 303 - -
Pte1g01690 324 SUPERFAMILY beta-beta-alpha zinc fingers 125 248 IPR036236 -
Pte1g01690 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 226 253 IPR013087 -
Pte1g01690 324 Gene3D Classic Zinc Finger 207 280 - -
Pte1g01690 324 ProSitePatterns Zinc finger C2H2 type domain signature. 228 248 IPR013087 -
Pte1g01690 324 ProSitePatterns Zinc finger C2H2 type domain signature. 128 148 IPR013087 -
Pte1g01690 324 SMART c2h2final6 226 248 IPR013087 -
Pte1g01690 324 SMART c2h2final6 126 148 IPR013087 -
Pte1g01690 324 Pfam C2H2-type zinc finger 226 250 - -
Pte1g01690 324 Pfam C2H2-type zinc finger 125 151 - -
Pte1g01690 324 MobiDBLite consensus disorder prediction 142 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01690 Pte-Chr1 38412912 38414535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01690 15 325 C2H2 Transcription Factor Family AT2G28200 42.154 2.52e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte1g01690 zf-C2H2_6 1.4e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01690 - - qsa:O6P43_000387 307.76