Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01685 ATGATGGCGGTGAGTTCAAGCTGTAAAGATGGCAGCAGTAGCAGTAAGGTGATGATGGACAATGGCAAGTACGTCCGATACACACCTGAGCAGGTAGAAGCCCTTGAAAGGCTTTACCACGAATGCCCAAAGCCCAGTTCCATGCGACGCCAGCAGCTCATCAGAGAGTGCCCCATCCTCTCTAACATCGAGCCAAAGCAGATCAAAGTTTGGTTTCAGAATCGAAGATGCAGAGAGAAGCAGCGCAAAGAGTCAGCTCGCCTGCAAGCTGTTAATAGGAAGCTTACAGCAATGAATAAACTCTTGATGGAAGAAAATGAGAGATTGCAGAAGCAGGTGTCTCAGCTGGTGTACGAGAATAGTTTTTTCCGACAGCAGACACAGAATAATACGACCCTAGCCACCACGGATACAAGTTGCGAGTCGGTAGTAACTAGTGGTCAACACCACTTGACTCCTCAGCATCCGCCAAGAGATGCCAGCCCTGCAGGACTTTTGTCCATTGCAGAGGAGACTTTAACAGAGTTTCTTTCAAAGGCAACGGGAACCGCCGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCTATTTCTCACGGTTGCCCTGGAGTGGCAGCCCGTGCATGCGGCCTTGTGGGTCTGGAGCCTACAAGGGTTGCTGAAATTCTCAAAGATCGTCCTTCTTGGTACCGTGATTGCCGAGCTGTGGATGTTCTAAATGCAATGTCCACAGGAAATGGTGGAACAATTGAGCTACTTTACATGCAGATGTACGCACCTACGACTTTGGCACCAGCTCGCGACTTCTGGTTGCTGCGCTATACATCTGCTTTGGAGGATGGTAGTCTTGTGGTCTGTGAAAGGTCACTCAACAACACTCAAAATGGTCCTAGCATGCCGCCAGTGCAGCATTTTACGAGAGCAGACATGCTACCTAGTGGTTATCTAATTAGACCTTGTGAAGGAGGTGGATCAATCATTCATGTAGTTGACCATGTGGATTTGGAGCCTTGGAGCGTACCCGAAGTATTACGACCACTATATGAATCATCAACATTGCTTGCTCAAAGGACCACAATGGCGGCTTTACGTCATCTAAGGCAGATCTCCCAAGAAGTTTCTCAGCCAAATGTTTCAGGGTGGGGAAGGAGACCTGCGGCTCTTCGCGCTCTTAGTCAACGTTTGAGCAAGGGCTTCAATGAAGCGGTCAATGGTTTTTCAGATGATGGATGGTCAATGTTAGACAGCGATGGGATTGATGATGTTACCGTACTGGTTAATTCATCTCCCAGCAAGGTTGTGGGCTCAAACCCTTGTTATGCCAATGGCTTTCCTTCTATGAACAACGCTGTCCTGTGTGCCAAAGCATCCATGCTGTTACAGAATGTGCCCCCAGCAATACTACTGAGATTCTTGCGGGAACATCGGTCGGAGTGGGCAGACAGCAGCATTGATGCTTACTCCGCTGCCGCAATTAAAGCTGGCCCCTGTATCTTGCCAGGGACTCGACCAGGAAGCTTTGCTGGTCAAGTTATTCTTCCTCTAGCTCACACAATCGAGCACGAAGAGTTTATGGAGGTCATTAAGCTAGAAAGTATGGGCTACTACAGGGAGGACATGACTATGGCCAATGATATCTTCCTCTTGCAACTCTGTAGCGGAGTAGATGAGAATGCTGTTGGCACTTGTGCCGAACTCATGTTTGCTCCCATTGATGCCTCATTTTCTGATGATGCTCCAATCATACCTTCTGGTTTTCGTATCATTCCCCTTGATTCTGGCATGGATACTGCTAGTGGAAACCGCACACTGGACCTTGCTTCTGCTCTGGAAATTGGGCCAACAGGAAATAAAACGCCGAGTGATAGTTCTATCAGCTCCGGGAGCAGTAAATCTGTTATGACAATAGCGTTTCAGTTTGCCTTTGAAATCCACCTTCAAGATAATATAGCAGCCATGGCTCGTCAATATCTTCGAAGTATTATTGCATCTGTTCAGAGGGTGGCATTAGCACTTTCGCCCACACGCTTTGGCAGTCATGCAGGTTTTCGGCTACCACCTGGCACTCCTGAGGCGCAGACTCTTGCTCGATGGATCTGCCAGAGCTACAGATGCTATCTGGGAGTCGAGCTATTGAAATGCGAAGGTAGTGAATCCATCCTCAAATCCCTTTGGCTTCATTCGGATGCGATCATGTGCTGCTCTCTCAAGCCATTGCCCGTTTTTACATTTGCAAATCAAGCCGGACTTGACATGCTGGAGACAACATTGGTTGCTCTTCAGGACATTACACTGGAAAAGATCTTTGATGATAATGGAAAGAAAACACTGTGCTCTGAGTTCCCACAGATTATGCAACAAGGTTTTATGTGCCTTCAAGGTGGTATATGCTTATCCAGCATGGGAAGGCCTGTGTCTTACGAGAGAGCAGTGGCCTGGAAAGTATTGAACGAAGAAGAAAACGCTCACTGCATTTGTTTCATGTTCATGAACTGGTCCTTTGTGTGA 2532 0.4787 MMAVSSSCKDGSSSSKVMMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESARLQAVNRKLTAMNKLLMEENERLQKQVSQLVYENSFFRQQTQNNTTLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDVLNAMSTGNGGTIELLYMQMYAPTTLAPARDFWLLRYTSALEDGSLVVCERSLNNTQNGPSMPPVQHFTRADMLPSGYLIRPCEGGGSIIHVVDHVDLEPWSVPEVLRPLYESSTLLAQRTTMAALRHLRQISQEVSQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFSDDGWSMLDSDGIDDVTVLVNSSPSKVVGSNPCYANGFPSMNNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCILPGTRPGSFAGQVILPLAHTIEHEEFMEVIKLESMGYYREDMTMANDIFLLQLCSGVDENAVGTCAELMFAPIDASFSDDAPIIPSGFRIIPLDSGMDTASGNRTLDLASALEIGPTGNKTPSDSSISSGSSKSVMTIAFQFAFEIHLQDNIAAMARQYLRSIIASVQRVALALSPTRFGSHAGFRLPPGTPEAQTLARWICQSYRCYLGVELLKCEGSESILKSLWLHSDAIMCCSLKPLPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFMNWSFV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01685 843 SMART HOX_1 20 86 IPR001356 GO:0003677
Pte1g01685 843 ProSiteProfiles 'Homeobox' domain profile. 18 82 IPR001356 GO:0003677
Pte1g01685 843 CDD homeodomain 23 83 IPR001356 GO:0003677
Pte1g01685 843 Gene3D - 202 384 IPR023393 -
Pte1g01685 843 Pfam START domain 168 376 IPR002913 GO:0008289
Pte1g01685 843 CDD bZIP 75 114 - -
Pte1g01685 843 ProSiteProfiles START domain profile. 158 386 IPR002913 GO:0008289
Pte1g01685 843 SMART START_1 167 377 IPR002913 GO:0008289
Pte1g01685 843 SUPERFAMILY Bet v1-like 167 379 - -
Pte1g01685 843 Gene3D - 14 90 - -
Pte1g01685 843 Pfam MEKHLA domain 702 842 IPR013978 -
Pte1g01685 843 SUPERFAMILY Homeodomain-like 21 85 IPR009057 -
Pte1g01685 843 CDD START_ArGLABRA2_like 162 377 - -
Pte1g01685 843 FunFam Homeobox-leucine zipper protein REVOLUTA 23 78 - -
Pte1g01685 843 Pfam Homeodomain 23 81 IPR001356 GO:0003677
Pte1g01685 843 Coils Coil 88 119 - -
Pte1g01685 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 18 843 IPR044830 GO:0003700
Pte1g01685 843 FunFam homeobox-leucine zipper protein ATHB-15 203 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01685 Pte-Chr1 38371748 38377858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01685 11 844 Homeobox Transcription Factor Family AT4G32880 80.930 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte1g01685 START 2.2e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01685 K09338 - qsa:O6P43_019487 1528.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01685 1 38371748 38377858 Pte1g01685 1 38371748 38377858 RCT