Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01683 ATGGAAGCTCAAGCACCGCAACTTTTCCACACCAGCTTTTCTCCAGAATTTAACTCTCATAACATCAACACCACAAATAATGGTGGTGGAGACCATTTTATGGTTGAGGACCTCTTTGACTTCTTCAACGAAGACGGCATCATCACCGACGGGATGTTCGACGCACTTACCGCAGGAAACTCCAACGACTGCTCCAACGTAGCAGCAGTCGATAGCAGCTGCAATTCATCATCTTTCTCCGGTTGCGAACCCAATCAATTCCCCGATGGCCGGTTCTCCGGTGACATTGGTGTGCCGTATGATGATTTAGCTCACCTGGAATGGCTGTCCAATTTTGTGGAGGATTCGTTTTCAAGCGACGACTTGCAGAAGCTTCAGTTGATATCCGGAATGAAAGCACGGACAGACGAAGCATCCGAGACCCGCGCATTCCAGTCCGAGCCGAACCGAAACAGCCCCATGTTTAGCTCTGAGCTCTCAGTTCCTGCCAAGGCTCGCAGCAAACGGTCACGTGCACCACCATGCAGCTGGACTTCCCGCCTTCTGGTCCTCACTCCAACAGAATCTGAAGTGGTCGTTCCAACTCCTCAAAGCGTCAACACCGTGAAGAAGCCAGGAAAGCCAACCATGCAAAGGAAGAAAGAAAACGGCGACGGTGGCTCCGGTGATGGGCGGAAGTGCCTGCATTGCGCGACGGATAAGACTCCACAATGGCGAACTGGACCCATGGGTCCGAAAACTCTATGCAACGCGTGTGGAGTCCGATACAAGTCAGGGCGGTTGGTTCCAGAGTACAGGCCAGCTGCTAGCCCAACATTTATGCTCACCAAACACTCGAACTCTCACCGGAAAGTGTTGGAGCTCCGTCGGCAGAAGGAGATGATGCGAACACAGCAAATGCAACAGCAGCAGTTTCTGCACCAACAAGGGATGATGTTTGATGTATCGAACGGTGGGGATTACTTGATCCACCAACATGTGGGGCCCGATTACAGGCAGATCATTTAG 1008 0.5188 MEAQAPQLFHTSFSPEFNSHNINTTNNGGGDHFMVEDLFDFFNEDGIITDGMFDALTAGNSNDCSNVAAVDSSCNSSSFSGCEPNQFPDGRFSGDIGVPYDDLAHLEWLSNFVEDSFSSDDLQKLQLISGMKARTDEASETRAFQSEPNRNSPMFSSELSVPAKARSKRSRAPPCSWTSRLLVLTPTESEVVVPTPQSVNTVKKPGKPTMQRKKENGDGGSGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSHRKVLELRRQKEMMRTQQMQQQQFLHQQGMMFDVSNGGDYLIHQHVGPDYRQII* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01683 335 MobiDBLite consensus disorder prediction 208 223 - -
Pte1g01683 335 ProSitePatterns GATA-type zinc finger domain. 227 252 IPR000679 GO:0006355|GO:0043565
Pte1g01683 335 CDD ZnF_GATA 226 273 IPR000679 GO:0006355|GO:0043565
Pte1g01683 335 SMART GATA_3 221 271 IPR000679 GO:0006355|GO:0043565
Pte1g01683 335 ProSiteProfiles GATA-type zinc finger domain profile. 221 257 IPR000679 GO:0006355|GO:0043565
Pte1g01683 335 MobiDBLite consensus disorder prediction 197 223 - -
Pte1g01683 335 PIRSF Txn_fac_GATA_plant 1 317 IPR016679 GO:0003677|GO:0005634|GO:0045893
Pte1g01683 335 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 223 285 - -
Pte1g01683 335 Pfam GATA zinc finger 227 260 IPR000679 GO:0006355|GO:0043565
Pte1g01683 335 FunFam GATA transcription factor 216 304 - -
Pte1g01683 335 PANTHER GATA TRANSCRIPTION FACTOR 24 302 - -
Pte1g01683 335 MobiDBLite consensus disorder prediction 137 157 - -
Pte1g01683 335 Gene3D - 220 271 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01683 Pte-Chr1 38345883 38347596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01683 1 336 C2C2-Gata Transcription Factor Family AT5G25830 49.167 7.57e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte1g01683 GATA 3e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01683 - - zju:107420464 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01683 1 38345883 38347596 Pte1g01683 1 38345883 38347596 RCT