Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01675 ATGGGTGCTGAACACCATAGCTATGAAACTGAGAGCAGCTCTAACTCACTCTCATCCCCACCACTGTCACCATCTTCACCTTCCTCAGTTAGGTCTTCTCTCCAAAGCTCAGTTTCACAGTCCGAACCTCAAGACCCGGAAGCAAAAAACATCAAACGAGCCAGAGACTCTAGCAAACACCCAGTTTTCCGTGGTGTCAGGATGCGCAGTTGGGGTAAATGGGTGTCGGAAATTCGTGAGCCCAGAAAGAAATCTCGTATATGGCTAGGTACATTCCCTAACCCCGAAATGGCAGCCAGAGCGCATGATGTTGCTGCTTTGAGCATCAAAGGTAACTCCTCCATTCTCAATTTCCCTGAACTCGTGAACTTGCTCCCTCGTCCGGTCTCACTATCGCCTAGAGATATTCAGGCTGCAGCTGCAAAAGCTGCTCAAATGGATAAATTTGACTCGCCATCCTCTTCTTCTTCCACCCTGTCATCTTCATTATCTTCTTTGGTATCTGCAATGGATTTGTCAACTGGGTCCGAGGAGCTAAGCGAGATAGTAACTTTGCCACGCTTAGATGACAGTTACGAGACAAAGTTCAGAAATGAGTTCATGTTCGTCGATGAATGGATGTACCCTCCACCATGGTTGCAGGGTTTGCAAGATTGTGAAGGGTACGTTGATCATGAACAGTTAGCAGCAGTGCCAGAAACCATTAGTTTTGACAGTTTTCTATGGAACTATCAGTGTTAG 741 0.4669 MGAEHHSYETESSSNSLSSPPLSPSSPSSVRSSLQSSVSQSEPQDPEAKNIKRARDSSKHPVFRGVRMRSWGKWVSEIREPRKKSRIWLGTFPNPEMAARAHDVAALSIKGNSSILNFPELVNLLPRPVSLSPRDIQAAAAKAAQMDKFDSPSSSSSTLSSSLSSLVSAMDLSTGSEELSEIVTLPRLDDSYETKFRNEFMFVDEWMYPPPWLQGLQDCEGYVDHEQLAAVPETISFDSFLWNYQC* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01675 246 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Pte1g01675 246 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Pte1g01675 246 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Pte1g01675 246 MobiDBLite consensus disorder prediction 1 61 - -
Pte1g01675 246 MobiDBLite consensus disorder prediction 46 61 - -
Pte1g01675 246 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 192 - -
Pte1g01675 246 MobiDBLite consensus disorder prediction 7 45 - -
Pte1g01675 246 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Pte1g01675 246 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Pte1g01675 246 FunFam Ethylene-responsive transcription factor 2 61 120 - -
Pte1g01675 246 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Pte1g01675 246 CDD AP2 63 121 IPR001471 GO:0003700|GO:0006355
Pte1g01675 246 Gene3D AP2/ERF domain 62 121 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01675 Pte-Chr1 38282806 38283802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01675 30 222 AP2-EREBP Transcription Factor Family AT5G11590 61.951 4.69e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte1g01675 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01675 K09286 - qsa:O6P43_015497 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01675 1 38282806 38283802 Pte1g01675 1 38282806 38283802 RCT