Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01668 ATGGAGAGGATCGTGGGAGGGAAGTTTAGGATGGGTCGAAAAATTGGGAGTGGATCGTTTGGTGAGATTTATTTGGCTACCGATATGGATTCTGGGGAGATTTTAGCCGTGAAGATGGAAAACAGTCATACAACAAATGCACAACTATTCTATGAAGCGAAGTTGTATGAGATTCTTCAACGAGGAGGTGGTATTCCTAGTATAAAATGGTGTGGAAGCGATGGGGAAAACAATGTTCTAGTCATGGATCTTCTTGGACCAAGTTTGGAGGACCTCTTTGTGTACTGTGGGAGGAAGTTTTCTTTGAAGACAGTCTTGATGTTGGCTGATCAGATGATTACAAGAGTAGAATACATGCATTCAAAAGGGTTTCTGCACAGAGACATAAAACCAGATAATTTTCTCATGGGCCTTGGTAAGAAAGCAAATCAGGTCTATGTTATCGACTTTGGGCTTGCGAAAAGATTCAGAGATCCTGCTAACAACAGGCACATCCCTTATAGAGAGAACAAAAATTTAACAGGCACTGCAAGATATGCAAGTTGCAATACTCATTTAGGGATTGAACAAAGTCGTCGGGATGATTTGGAGTCTCTTGGATATGTTTTAATATACTTTCTAAGAGGGAGCCTTCCTTGGCAGGGCCTAACAGCTGGCACCAAAAAGCAAAAATATGACAAGATTTGTGAGAAGAAAGTATCAACTCCCATTGAGATTCTCTGCAAATCATATCCTGTGGAGTTTGCATCTTACTTCCATTACTGCCACTCTTTGAAATTTGATCAACGACCTGATTATGGGTTTCTGAAGCGATTATTCCGTGACTTGGCTTCTCGTGAAGGATATGATTTTGACTATATATATGACTGGACTATTCTAAAGTATCAGAAGACCCAACGAAAGAAGGCACTGGGACAATTTCCTGGAGTAACTGGTGTTGAGGCAATGCGAACAGACGCAAATAAGCAGAAAGGAGTCAATGATGCTTCTCACTCAGCTTGGACTGGAGAGCCTAGAGGGTTGACAAATGTTAGTCGTCCAGATAGTCATTCTCAGTATAGACCATTCCAATTAAAAACCAAAAATTTGGTAGAGAAGCATGTGAGTTATATAATCTCAAGTTATCTTCGGCTTTGTCTTCCAATCCTTGATAAAACAATTTCGGTCCATATTCCTGAACATGCTTCCCTATTTGATATACGTGGAGTTGCATTTTGTCAGATTGCCTTCTGCACTCTTTTATGTAAACAATTATTGCAGCCTTCAATTATGCTATTCAGCTTTGGCGAGCAATTTGTAAGAGTGATCAACAGTTTTACTGAATAA 1326 0.3997 MERIVGGKFRMGRKIGSGSFGEIYLATDMDSGEILAVKMENSHTTNAQLFYEAKLYEILQRGGGIPSIKWCGSDGENNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRVEYMHSKGFLHRDIKPDNFLMGLGKKANQVYVIDFGLAKRFRDPANNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLIYFLRGSLPWQGLTAGTKKQKYDKICEKKVSTPIEILCKSYPVEFASYFHYCHSLKFDQRPDYGFLKRLFRDLASREGYDFDYIYDWTILKYQKTQRKKALGQFPGVTGVEAMRTDANKQKGVNDASHSAWTGEPRGLTNVSRPDSHSQYRPFQLKTKNLVEKHVSYIISSYLRLCLPILDKTISVHIPEHASLFDIRGVAFCQIAFCTLLCKQLLQPSIMLFSFGEQFVRVINSFTE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01668 441 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01668 441 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Pte1g01668 441 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pte1g01668 441 PANTHER CASEIN KINASE-RELATED 13 321 - -
Pte1g01668 441 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte1g01668 441 SMART serkin_6 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01668 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte1g01668 441 FunFam CK1 family protein kinase 1 325 - -
Pte1g01668 441 ProSiteProfiles Protein kinase domain profile. 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01668 Pte-Chr1 38247080 38252475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01668 8 213 MAP Kinase Kinase Kinase AT3G06030 27.727 2.09e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte1g01668 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01668 K08960 - tcc:18587959 573.163