Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01662 ATGAACCCTACACAAGCTGAGAGAGAAGAAGGGATAGTTCCTCTGACTGATTCATTGCCTGTTATTTCTCAGTCATATGTGATTCATTCCCTCAGAGTGGAAGGGGTCAGGGGCATTGTAACAGTTCCTGCTCAGCTGGAATCTACAACCCTTGTTTTTGCATATGGAGTTGATTTATTTTTCACCAGGATTGCTCCATTACGCACCTACGATTTGCTCACTGAAGATTTAAGCTACGCTCTGCTACTCATTACTATTGTTGCCCTCTTAGCAGCAATATTTGTAACTTGGGTGTTGTCGGAGAGGAAAGAACTGCAGGAGAAGTGGAGGATAAAAGAAGTGAGAGAGATGTACCAAAAAGAAAAAGATGTAGGTGAGAGAGAGAGAAGTCCCACTAATGCTACTACTCCTCACTCATCCACCTTCCCTCTCACTAATACAACGTCCACTCCGCCTCTGCCAGCACCGCAACCACCATCACAGTCCGATCCACCACCCCGAGTTCCCTCTAAACCAGAATGCGAGTCATCTTCCTCGTCGTCTTCTTCTTCTGCAACTACCTCTCAGAGCTTCACTCAGTGGAAATTTCCACTATCCACTTCGACCACCTCTACCGTCACTCTCACAGGTCCTCCACCTCAAACCCAACACTCGTTAAATAACCCCCTACCCTGTCCACACCTCCAGGAACTCTTCCACCTAGCGGAACTCCAACTCAGCTCCGGGTTGGACACTGATCGCTTCTCAGCATTTCAGCTCTTGGAGCGGTCCCTCGTACCCAATCCGCCATCCGAAGACCCTCCCTGTCCACCGGCACTGATGCGTGGGATAGTCTGTAATCTGAAGAATACGAAGGGGGTGAAATCAGCCACCAAGATCCTTTTCGCGCTGTGCCTGGCGGAAGTGAACCGGCGGGTGGCAGTGGAGGCAGGGGCTGTAGCTGCTGTGATTGAGTCAGGACCTGAGCTAGACGGACCACCGGCGGAGAGGGCCCTAGCTGCGCTGGAGCTCATGTGCATGGTGCCTGAGGGGGCAGCGGAAGTGCGAGACCACGCACTTGCTGTGCCAGTGATGGTGACAATGATGGGGAAGACGGCAGCACGTGGGAAGGAGTACGCGATCGGAGTGCTAGCCGTCATATATAACGGAGCACTTGGAGATCACGTGTCAGCTCCTCCCGAAGAGGTGGCGCGTGCTGTGTCTTTGGCCCTGCAGAGTGAGTGTAGCGTGAGAGGAAGGAGGAAAGGAGCACAGCTCTTGAAGACTCTGCAAGATTATGGAAGGCCAGCATTGGCGGAAGATGGCAAATGA 1311 0.5225 MNPTQAEREEGIVPLTDSLPVISQSYVIHSLRVEGVRGIVTVPAQLESTTLVFAYGVDLFFTRIAPLRTYDLLTEDLSYALLLITIVALLAAIFVTWVLSERKELQEKWRIKEVREMYQKEKDVGERERSPTNATTPHSSTFPLTNTTSTPPLPAPQPPSQSDPPPRVPSKPECESSSSSSSSSATTSQSFTQWKFPLSTSTTSTVTLTGPPPQTQHSLNNPLPCPHLQELFHLAELQLSSGLDTDRFSAFQLLERSLVPNPPSEDPPCPPALMRGIVCNLKNTKGVKSATKILFALCLAEVNRRVAVEAGAVAAVIESGPELDGPPAERALAALELMCMVPEGAAEVRDHALAVPVMVTMMGKTAARGKEYAIGVLAVIYNGALGDHVSAPPEEVARAVSLALQSECSVRGRRKGAQLLKTLQDYGRPALAEDGK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01662 436 MobiDBLite consensus disorder prediction 149 171 - -
Pte1g01662 436 MobiDBLite consensus disorder prediction 120 222 - -
Pte1g01662 436 Pfam ER membrane protein complex subunit 1, C-terminal 2 109 IPR011678 -
Pte1g01662 436 MobiDBLite consensus disorder prediction 130 148 - -
Pte1g01662 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 131 434 - -
Pte1g01662 436 MobiDBLite consensus disorder prediction 172 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01662 Pte-Chr1 38211401 38216159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01662 272 425 U-box Gene Family AT1G49780 34.591 3.77e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01662 - - pcin:129302427 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01662 1 38211401 38216159 Pte1g01662 1 38211401 38216159 RCT