Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01655 ATGGAAAGTGACAAAACAACCTCTACTCCTTCGTATGGGCTTGGTGAGAATATTCCGAAGATAAGAGCTCTTCATGGAAGGACTAGTGGCCCTACTAGGCGTTCTACAAAAGGGCAGTGGACACCTGAAGAGGATGAAATATTAAGGGATGCTGTTGCTCGGTTCAAAGGGAAGAATTGGAAAAAAATAGCTGAGTGTTTCAAAGATAGAACCGATGTACAATGCCTACACAGGTGGCAGAAAGTTTTGAATCCAGAGCTTGTCAAAGGTCCGTGGTCTAGAGAGGAAGATGAAGCGATAGTTGAACTGGTGAAAAAGTATGGACCCAAAAAATGGTCTACAATAGCGCAACATCTTCCAGGGCGTATTGGTAAGCAGTGTCGGGAAAGGTGGCATAATCATCTTAATCCATCAATAAATAAAGAAGCATGGACCCAGGAAGAGGAATTAGCTCTTGTTCGTGCTCATCAGATTTATGGGAATAGATGGGCAGAGTTGACAAAGTTCTTGCCTGGGAGGACAGACAATTCTATAAAGAATCACTGGAACAGCTCTGTCAAAAAGAAGTTGGATTCTTACTTGAAATCGGGTTTACTCGATCAGTTTCCAGCAAATCAACACATTGTGACAATCACTTCGAAGGTGCAGACCAGTGAAGATGATGGTGGTCCTAAGGGAGCAGAAGGAGAGGATGTTTCAGAGTGTAGCCAGGACTCAAACCCTGTTGGTGCATTTGAGCCTGGAAGAGAAATTGTAGACGTGGTTTTACATAAAAGACAGGACTATTGTTCAAATGAAAATTCTGGTCCAAGAAATGAGCAACACTCTTGTCTACTGCCATGCTCAGATTCATATTACGCATCTATGGATGATGACAGCATTTACATCCCAGATTTACCTCGGCACGAATGTTGTCCTTCTCAATTTATAGAGCAGAAATTCTGGAATGATACTAGGGATTCAACAAACAAGGATAACCAATTTGGGTTGGTGCAGGATTCCTCACAAACAATTAGTGCAGTCACTGGCAAAATGGATGATGAGAATGTCCCATTTCAAACTTCCGTTGGGTTTTTTGATACTTCTACCTCCATGGGATTTTCAAGTGTGGATTCTGATAAGTTACACATGTTGATATCAGATGATGAATTCTGTAAAGTCTTATTAACTGAGTCAATGCATGACGACAGCTTTTCATGTGGAGATTATACAAACGAATCCAATTTGATAGTATTCTCTGGAAGTACTTCCTATCTTTGCCAGTCATCGGACAGCACACAAAAGTCTGAAATGGAAAGAATTACACCATCTCAACTAAGTTGTCCTCTGAAACCCGAAGGTTTATCTGCAATTTCATGCCAGCAGTCTTTAGTATCGATTCCTTCGGAACTTGCAATTGGTAGTAGTAGTAGTCTGGTGTATGATTTTGAACCCAACAGGTTATTTGGACTGGAAAAACATGAATCAGTCTTTGAAGCTCATGATGCTTTTATTCATTCTCCTTGCAAGAATGATAGAGTTGATTTTGTAACGTTAGAGCATCAGGACCTTGTGAAAGATAATTTAAAATTGGTATCTGTAAATACTTTTGGTTGTGCATCAGACAAGAAGCAAATATGTTCCTCATTTGGTGATATACCAAATGAACATGTAGAGCAAGAGAAAGCGGGAGCATTGTGCTATGAACCTCCCCGTTTTCCAAGCTTGGACATCCCTTTCTTTAGCTGCGACCTTATCGAATCTGGAACTGATATGCAGCAAGAGTTCAGCCCCTTGGGTATTCGCCAGCTCATGATGTCCTCTACGAAGCCCCTTACCCCTTTTAGGCTATGGGATTCTCCATCTCTTGATGCTAGTCCAGATGCTGTGCTGAAAAGTGCTGCTAGAACTTTTACCGGTACACCGTCCATTTTGAAGAAACGAAACCGGGATTTATTAACGCCTTTGTCAGACAGAAGAATTGACAAGAAACTTGATATGGCGTCTGCCTTAAGTAGGGATTTTTCACGTCTAGATGTCATGTTTAATGACAGTGAGAATCAGGAATCACCTTTGCACACCACATCTTCAATGAGACCTACCCGAGTCTCTGATAAAGAGCATTTTGAGCAAGCAGTGGAAGATGAGAAAACAGAGGAGAATAATGAAACTGCATTTTCAGATGACAAAATCTCAGTAAATGGAAGTGGTAGAAGTGGTACGAAGCATGAGATTAAGGAAGGGACTGGTATTGCACACGCTGCTGAGACAATGGTTGGTGCCAATAAGCAAGCTGGCGAGGATGTGCAACAATTTCCAAGAGTCCTGGTTGAACATGATATGAATGATCGACTACTATATTCTCCAGATCAAGTTGGTCTAAAAGCACATAGAAGTCTGGAGGCTTGCAGAAACATAAGCTCCCCTGCACTTAAAGAAAAGGAGCTTGAAAGGCAGTCTGCTGCTGGTACTTGTTTACAACCTTTCTCCTTATCAGCACCAAGGGAGAATAAATATGATAATGCAGGAACTGACACTGGTTTTGAATCATTAAGCATATTTGTAGGAACACCATTCAAAAGGAGCATTGACTCACCATCAGCGTGGAAATCCCCATGGTTCATAAATACCTTCTTACCTAACCAGTCGCTGGAGGATGTTAGGTTCTTCATGAGCCCAGGTGATAGAAGCTACGATGCCATAGGGTGGATGAAACAGATAAGCGAGCAGACTGCTGCTGCATACGCCAATGCTGAGGAGGTTTTGGTAAATGAAACCCCCAAAACCATAAAAAACGACAAATCTAGCCAAGAGGAGTATCCATCCCAAGAAAACAACCATTCTGCTGACCAACCGGTGAACGTTTCTCAAGTGGCGTCTAATACTTTGATGGAGCGGCGCACACTTGATTTCAGTGAATGTGGAACACCAGGGAAAATCCATGACAATGGGAAACCCTCGGCCATGAATTTTTCAAGTCCATCCTCTTATTTGTTGAAAAGCTGCAGATAG 2991 0.4199 MESDKTTSTPSYGLGENIPKIRALHGRTSGPTRRSTKGQWTPEEDEILRDAVARFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSREEDEAIVELVKKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALVRAHQIYGNRWAELTKFLPGRTDNSIKNHWNSSVKKKLDSYLKSGLLDQFPANQHIVTITSKVQTSEDDGGPKGAEGEDVSECSQDSNPVGAFEPGREIVDVVLHKRQDYCSNENSGPRNEQHSCLLPCSDSYYASMDDDSIYIPDLPRHECCPSQFIEQKFWNDTRDSTNKDNQFGLVQDSSQTISAVTGKMDDENVPFQTSVGFFDTSTSMGFSSVDSDKLHMLISDDEFCKVLLTESMHDDSFSCGDYTNESNLIVFSGSTSYLCQSSDSTQKSEMERITPSQLSCPLKPEGLSAISCQQSLVSIPSELAIGSSSSLVYDFEPNRLFGLEKHESVFEAHDAFIHSPCKNDRVDFVTLEHQDLVKDNLKLVSVNTFGCASDKKQICSSFGDIPNEHVEQEKAGALCYEPPRFPSLDIPFFSCDLIESGTDMQQEFSPLGIRQLMMSSTKPLTPFRLWDSPSLDASPDAVLKSAARTFTGTPSILKKRNRDLLTPLSDRRIDKKLDMASALSRDFSRLDVMFNDSENQESPLHTTSSMRPTRVSDKEHFEQAVEDEKTEENNETAFSDDKISVNGSGRSGTKHEIKEGTGIAHAAETMVGANKQAGEDVQQFPRVLVEHDMNDRLLYSPDQVGLKAHRSLEACRNISSPALKEKELERQSAAGTCLQPFSLSAPRENKYDNAGTDTGFESLSIFVGTPFKRSIDSPSAWKSPWFINTFLPNQSLEDVRFFMSPGDRSYDAIGWMKQISEQTAAAYANAEEVLVNETPKTIKNDKSSQEEYPSQENNHSADQPVNVSQVASNTLMERRTLDFSECGTPGKIHDNGKPSAMNFSSPSSYLLKSCR* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01655 996 CDD SANT 91 135 IPR001005 -
Pte1g01655 996 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Pte1g01655 996 SMART sant 140 188 IPR001005 -
Pte1g01655 996 SMART sant 36 85 IPR001005 -
Pte1g01655 996 SMART sant 88 137 IPR001005 -
Pte1g01655 996 MobiDBLite consensus disorder prediction 979 996 - -
Pte1g01655 996 MobiDBLite consensus disorder prediction 214 243 - -
Pte1g01655 996 FunFam Transcriptional activator Myb isoform A 36 88 - -
Pte1g01655 996 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Pte1g01655 996 Gene3D - 36 88 - -
Pte1g01655 996 MobiDBLite consensus disorder prediction 919 947 - -
Pte1g01655 996 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Pte1g01655 996 FunFam Transcriptional activator Myb isoform A 89 141 - -
Pte1g01655 996 MobiDBLite consensus disorder prediction 679 736 - -
Pte1g01655 996 MobiDBLite consensus disorder prediction 964 996 - -
Pte1g01655 996 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Pte1g01655 996 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Pte1g01655 996 MobiDBLite consensus disorder prediction 693 719 - -
Pte1g01655 996 CDD SANT 40 83 IPR001005 -
Pte1g01655 996 Gene3D - 142 206 - -
Pte1g01655 996 FunFam Transcription factor MYB3R-2 142 204 - -
Pte1g01655 996 MobiDBLite consensus disorder prediction 1 41 - -
Pte1g01655 996 PANTHER MYB PROTEIN-RELATED 37 110 - -
Pte1g01655 996 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Pte1g01655 996 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Pte1g01655 996 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Pte1g01655 996 CDD SANT 143 183 IPR001005 -
Pte1g01655 996 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Pte1g01655 996 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Pte1g01655 996 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Pte1g01655 996 Gene3D - 89 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01655 Pte-Chr1 38161424 38166861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01655 21 997 MYB Transcription Factor Family AT4G32730 43.177 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte1g01655 Myb_DNA-bind_6 5.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01655 - K09420 qsa:O6P43_015528 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01655 1 38161424 38166861 Pte1g01655 1 38161424 38166861 RCT