Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01645 ATGGCGAACGGTACGGATACAGAGGAGTTTGTTGTGTTGTCTCGTGTGAGGACGGGTCTGAAGAGAGAGTTTCAATTTGCTTTGAAGGCTCAAGCTGAGATCTGTGGGTCTCTGGGTCGGACTCGGGGTAGCAAAAATCGAAATGGGTTGATTGAGAATCCCGGTAGCAGTAACAAGAGGCTGAAGACTTCTACTTCCAAAAAAAATGCTGTGGAAAAGGATCAGGAGAGGGAGCCATTGGATTCTAAAGATGTGAAGGGGGACGAGGTGGCTGCTGTAGAGGTTCTGGGTGATCCTATTAGCGAAGAGGAGGCTAAGAGTGATGTAGTAGATCTAATGAGCGATGATGAATTCAAAAGTTTGGTAGGAGAGTCAGAGGAGAGGGTGGTTCCTAAGAGTATGGAAGCCGTACCCAATATTGAAGGGGACTCAAAAAGCTATGCGGTGGAGACTGTGGTCGATGTTGAGTGCAAAAATACGATGGAAGAAGAGCAGGGGAAGACGGTACCGGATGGCCGGGCTCAAACGGCTATTTGCGAAGAGGAAATGAAATCTGGTTCAGTGTTACCTTCGGGTGTGGAAGAGATAATTTCTCAGGTGAGAGAATTAGACGAAAAGATGGAATCCAAAAGTGAGACTGCGATGACCTTTTGCGAGGATGATGTGAAAAGTGATGTGGTGGAAATTGTTAGTGACGACGAGCATAAGAATTGTCCAGGTGAAATGTGCGAACCGAATTGCAAAACAGAATCAGTACAAAAGAATACTAATTCAATGGAGAACCAGGTGGATCAACTGTCTGAAACAGAGATTGATAAGTCATTTGTGAACAGCACGAATCTTTCTGCTGTTGAAGAAAATGTTGCGACAACTCCAGTTCAGGTAAATGTTGAGGGCAAGGTGGAGCATACTTTGCTGGAGAAGCCAATGAGGCGGTTTACGCGCTCTGCTTTGAAACCAAAACTGGAGACAGTGGTGGAAATTGTTAGTGACGATGTGCGTAAAAGTTTTCCAGGTGAAATCTGTGAACTGAGTTGTAAAACAGAATCAATACAGTTGAATGATAATTCAAAGGAGAACCAGGTGTATCATCTTTCTGAAACAGAGACTGATAAGTCATTTGTTAATCATACAAATAATTCTGTGGTAGAAGAAAATGTTTCAGCAACTCCAGTGCAGGTAAAAGTTGAGTTCGAGGATAGTTTGGTTGAGAAGCCAATGAGGCGGTTTACACGCTCCGCATTGAAACCAAAATTGGAGACGGTGGTGAAAGCAGAGAGTGTGGCTGAAGATACTTGTTTCAGTCCTGCTGGAAATGGCATCGATGGAAATGGGGACAGTGATGTTAACCAGTCATACTTGTCACCCCCTCAACACGGTACGCCTGGGAGTACAACGAAGAAGTTCCCTTCGAAACTGAAAGACCTTCTGTCGACTGGCATTCTTGAGGGACTATCTGTAACGTATATTAGAGGCTCTAGGGTAAGAAGGATAGGAGAGGTGGGACTCAGAGGTGTGGTGAGTGGCTCTGGGGTATTGTGCTGGTGCAATTCTTGTAAGGGAAACGTGGTTGTCACTCCCTCTGTTTTTGAGCTGCATGCTGGTAGTTCAAATAAACGCCCCCCTGAGTACATTTACCTGGAAAATGGAAATACCCTTCGTGATGTCATGAATATATGTTCAAGTGCCCCCTTAGATACCTTGGAAAGTGCTCTTCAGAAAATTATTGGACTCTCTGAATTGAAGAAGTCTAACGTCTGTTTGAATTGTAGAGGAGCTTTTCCTACCATTGGTAACCAGTCTGCAGTATTGTGTAATTCATGCAAGGGCTTGAAAGAGCTTGAACCCAGGTCTATTCATACCAGCAGCACTTGCAACAGAACACCAAGAATGCACGTGGTTCCAAAGTCTTCACCCAGTGACACTGCATTGAAGTGTAGTACATCTCGGGGTAAGACCCAAGGGAGGCTAACTAGAAAGGATCTACGTTTGCATAAGTTGGTTTTTGAGGAAGATGTCCTACCAGATGGAACTGAAGTAGCTTACTATGCACGTGGCCAGAAACTCCTGGTTGGTTATAAAAAGGGTTTTGGAATCTTTTGTACCTGTTGTGACTCAGAGGTCAGCCCTTCACAGTTTGAGGCTCATGCTGGTTGGGCCTCCAGACGCAAGCCTTACCTGCACATCTATACATCAAATGGGGTCTCTCTCCATGAATTGTCTGTCTCTTTATCAAGAGGTAGGAAGTTTGCTGCCAATGAGAATGATGATCTCTGCAGCATATGTTCAGATGGAGGAAATCTCATATGTTGTGATGGTTGCCCTAGGGCATTCCACGTAGATTGTGTCCCTCTTTCATGCATTCCAAATGGTATATGGTACTGTAAATACTGTCAGAGTTCTTTTCAGAGAGACAAATATGTGGAGCACAATGCAAATGCTGTTGCTGCTGGAAGGATTGCAGGAGTTGATCCTTTCGAACAGATAAATCAAAGATGCATTCGAATTGTAAAAAATGTAGAGGTTGACCAGGGTGGATGTGCACTTTGCAGAAGCCAAGATTTCAGCAAAAGCTTTGGTTCTCGCACTGTGATAATCTGTGATCAGTGTGAGAGGGAATATCATGTTGGCTGTTTGAAGGATAACAATATGCAGGTCCTTGAGGAGTTACCTGAAGGCAACTGGTTCTGTTGCGCAGAATGCAAGCAAATTTACTCTGCTCTGTCCAATTTGGTGGTTCAGGGTGATGAGAAACTTCCTGATCCACTATTGGATGTGATAAAGAAGAGGTCCGAAGGAAAAGTTTTAGAAAGTGGAGGCAGTCTTGATGTAAGATGGAGGCTTCTTAATTGGAAATTGTCTTCTTCTGATGAAACCAGGCAGTTGCTTTCAAAGGCTGTTGCCATCTTTCATGAGCGCTTTAGTCCAATTGTGGATGCTGCTTCTGGTCATGACTTCATTCCTTCAATGCTTTATGGGAAGAATATTAAGGGGCAAGATTTTGGTGGGATGTATTGTGCTATACTCACTATCAACCAATCTGTCGTCTCTGCTGGGGTTTTCCGTGTCTTTGGGCGTGAGGTGGCAGAACTTCCTTTGGTGGCTACAAATACAGATTGCGAAGGACAGGGTTACTTCCAGTCGTTATTTTCTTGCATTGAGAAGCTGCTTGGGTCTCTAAATGTGAAACATCTGGTGCTACCCGCTGCTGAGGAAGCTGAATCAATATGGACTAATAAATTTGGTTTTGGGAAGTTAAGTCATGATGAGATCAATGAATACAAAAAGCATTACCAAATGGTGATATTTCAAGGGACGTCAGTGCTGTCAAAGCCTGTTCCTGCATTCTGA 3351 0.4405 MANGTDTEEFVVLSRVRTGLKREFQFALKAQAEICGSLGRTRGSKNRNGLIENPGSSNKRLKTSTSKKNAVEKDQEREPLDSKDVKGDEVAAVEVLGDPISEEEAKSDVVDLMSDDEFKSLVGESEERVVPKSMEAVPNIEGDSKSYAVETVVDVECKNTMEEEQGKTVPDGRAQTAICEEEMKSGSVLPSGVEEIISQVRELDEKMESKSETAMTFCEDDVKSDVVEIVSDDEHKNCPGEMCEPNCKTESVQKNTNSMENQVDQLSETEIDKSFVNSTNLSAVEENVATTPVQVNVEGKVEHTLLEKPMRRFTRSALKPKLETVVEIVSDDVRKSFPGEICELSCKTESIQLNDNSKENQVYHLSETETDKSFVNHTNNSVVEENVSATPVQVKVEFEDSLVEKPMRRFTRSALKPKLETVVKAESVAEDTCFSPAGNGIDGNGDSDVNQSYLSPPQHGTPGSTTKKFPSKLKDLLSTGILEGLSVTYIRGSRVRRIGEVGLRGVVSGSGVLCWCNSCKGNVVVTPSVFELHAGSSNKRPPEYIYLENGNTLRDVMNICSSAPLDTLESALQKIIGLSELKKSNVCLNCRGAFPTIGNQSAVLCNSCKGLKELEPRSIHTSSTCNRTPRMHVVPKSSPSDTALKCSTSRGKTQGRLTRKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIFCTCCDSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSVSLSRGRKFAANENDDLCSICSDGGNLICCDGCPRAFHVDCVPLSCIPNGIWYCKYCQSSFQRDKYVEHNANAVAAGRIAGVDPFEQINQRCIRIVKNVEVDQGGCALCRSQDFSKSFGSRTVIICDQCEREYHVGCLKDNNMQVLEELPEGNWFCCAECKQIYSALSNLVVQGDEKLPDPLLDVIKKRSEGKVLESGGSLDVRWRLLNWKLSSSDETRQLLSKAVAIFHERFSPIVDAASGHDFIPSMLYGKNIKGQDFGGMYCAILTINQSVVSAGVFRVFGREVAELPLVATNTDCEGQGYFQSLFSCIEKLLGSLNVKHLVLPAAEEAESIWTNKFGFGKLSHDEINEYKKHYQMVIFQGTSVLSKPVPAF* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01645 1116 Gene3D - 944 1111 - -
Pte1g01645 1116 SUPERFAMILY FYVE/PHD zinc finger 753 802 IPR011011 -
Pte1g01645 1116 Pfam Tify domain binding domain 692 741 IPR032308 -
Pte1g01645 1116 Pfam Tify domain binding domain 505 559 IPR032308 -
Pte1g01645 1116 ProSitePatterns Zinc finger PHD-type signature. 847 901 IPR019786 -
Pte1g01645 1116 PANTHER AUTOIMMUNE REGULATOR 193 1113 - -
Pte1g01645 1116 MobiDBLite consensus disorder prediction 41 64 - -
Pte1g01645 1116 MobiDBLite consensus disorder prediction 65 88 - -
Pte1g01645 1116 SMART PHD_3 846 902 IPR001965 -
Pte1g01645 1116 SMART PHD_3 758 799 IPR001965 -
Pte1g01645 1116 FunFam PHD finger family protein 943 1112 - -
Pte1g01645 1116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 841 904 IPR013083 -
Pte1g01645 1116 MobiDBLite consensus disorder prediction 39 88 - -
Pte1g01645 1116 ProSiteProfiles Zinc finger PHD-type profile. 756 801 IPR019787 -
Pte1g01645 1116 SUPERFAMILY FYVE/PHD zinc finger 838 899 IPR011011 -
Pte1g01645 1116 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1002 1090 IPR016181 -
Pte1g01645 1116 CDD PHD1_AIRE 758 798 - -
Pte1g01645 1116 Coils Coil 249 269 - -
Pte1g01645 1116 MobiDBLite consensus disorder prediction 435 469 - -
Pte1g01645 1116 MobiDBLite consensus disorder prediction 444 469 - -
Pte1g01645 1116 Coils Coil 193 213 - -
Pte1g01645 1116 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 745 822 - -
Pte1g01645 1116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 745 824 IPR013083 -
Pte1g01645 1116 MobiDBLite consensus disorder prediction 622 649 - -
Pte1g01645 1116 ProSitePatterns Zinc finger PHD-type signature. 759 798 IPR019786 -
Pte1g01645 1116 ProSiteProfiles Zinc finger PHD-type profile. 844 904 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01645 Pte-Chr1 38071083 38077909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01645 470 1113 PHD Transcription Factor Family AT2G36720 45.961 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01645 - - pcin:129313514 1031.17