Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01635 ATGGAGTTTTGGGGTATTGAGGTGAAAGCAGGAGAGCCCCTTAAAGTACCTGTAGATGATGATTTTGTTGTACATCTTTCACAGGCAGCACTGGGAGAGTCAAAAAAAGAAAAAGGAAATGAGCCTGTTGTTATTTTTGTGGAATTTGATACCAAGAAGTATGTTTTGGGAACACTATCAAGAGAGAGTATCCCACAGATTTCTTTTGATGTTGTGTTCGAGAAAGAATTTGCTCTCTCTCATAACTGGAAAAATGGAAGTGTGTACTTCTGTGGTTACAAAGCTAATCAGGGACCAAATGATGAATCCGAGGATGATTTTTCTGATGAAGATTTGTTAGATGAGGATTTTGCTGTACCACTGCAGCCTTCTTTCAATGGTAAAGCTGATTTGAATGTTAAAGAAGCTAAGTCTACGGCAAAGAGCAATGCTTATCAGGTGGAACTTCCAGGGAAAAAAGTCAAGATTGCTGATCAAAAGGAGAATGATGAAGATGATGATGATTCAAGTGAATTTGAATCTGATGAAGATGAATCTGGTGATTCTGATGAGGATATGATCAATGCTGAAGATGGAAGTGATGATGATAGCGATGAGGATGAAGAGGAAGAGGAGCCTCTACCAAAGGGAAAGAAGAGAACCATTCCAGTCCAGCAAAAGACTCCTGTTCCATTAAAAAAATCTAAACCATCAACTCCTCAGAACACTGATGCCAAAAAAGGTGCTCATACCGCAACCCCTCATCCTGCAAAGAAGGCTGGGAAGGCTACTGCCAGTGGTGAACAAACTCCAAAATCAACAGGAGGACAGTTTTCTTGCAAATCCTGTAAAAAGGAATTTGGTTCTGAAAGTGGGCTGGAGCAGCATACAAAGGCTAAGCATAGTTCTTGA 891 0.404 MEFWGIEVKAGEPLKVPVDDDFVVHLSQAALGESKKEKGNEPVVIFVEFDTKKYVLGTLSRESIPQISFDVVFEKEFALSHNWKNGSVYFCGYKANQGPNDESEDDFSDEDLLDEDFAVPLQPSFNGKADLNVKEAKSTAKSNAYQVELPGKKVKIADQKENDEDDDDSSEFESDEDESGDSDEDMINAEDGSDDDSDEDEEEEEPLPKGKKRTIPVQQKTPVPLKKSKPSTPQNTDAKKGAHTATPHPAKKAGKATASGEQTPKSTGGQFSCKSCKKEFGSESGLEQHTKAKHSS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01635 296 MobiDBLite consensus disorder prediction 280 296 - -
Pte1g01635 296 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Pte1g01635 296 MobiDBLite consensus disorder prediction 161 204 - -
Pte1g01635 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 271 296 IPR013087 -
Pte1g01635 296 Gene3D Nucleoplasmin core domain 1 99 - -
Pte1g01635 296 FunFam Histone deacetylase HDT1 1 99 - -
Pte1g01635 296 ProSitePatterns Zinc finger C2H2 type domain signature. 273 294 IPR013087 -
Pte1g01635 296 MobiDBLite consensus disorder prediction 150 296 - -
Pte1g01635 296 MobiDBLite consensus disorder prediction 224 241 - -
Pte1g01635 296 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01635 Pte-Chr1 37964135 37967749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01635 1 296 C2H2 Transcription Factor Family AT5G03740 41.456 2.24e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte1g01635 NPL 4.4e-13 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01635 - - cave:132164179 263.848