Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01608 ATGGCACCCAAGAAGGATAAGGCTCCACCACCGTCATCAAAGCCTGCCAAGTCCAGCGGCGGGAAGCAAAAAAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTCGACCAGGGAACATACGACAAGCTGATTTCCGAAGTTCCCAAGTATAAACTCATAACGCCGTCTGTTTTGTCCGACAGATTGAGGATTAATGGATCTTTGGCACGGCGGGCAATGAAGGATTTGATGGCAAGAGGATCAATTAGGCTAGTTTCAGCTCATTCCAGCCAACAAATTTACACAAGAGCAACCCACGCGAATTGA 330 0.4667 MAPKKDKAPPPSSKPAKSSGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLISEVPKYKLITPSVLSDRLRINGSLARRAMKDLMARGSIRLVSAHSSQQIYTRATHAN* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01608 109 Pfam S25 ribosomal protein 7 105 IPR004977 -
Pte1g01608 109 PANTHER 40S RIBOSOMAL PROTEIN S25 1 107 IPR004977 -
Pte1g01608 109 MobiDBLite consensus disorder prediction 1 36 - -
Pte1g01608 109 FunFam 40S ribosomal protein S25 21 109 - -
Pte1g01608 109 Gene3D - 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01608 Pte-Chr1 37694712 37696841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01608 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 87.850 3.94e-54 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01608 K02975 - vvi:100249356 154.066