Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01592 ATGTCTTCCAACAAAAAGAGCCTCCTGAAAACCCTACTCACAGTAAATGCAGGATGTGGATGTGGCAGGCCAAAGCTCTCAGATGTTAAGGAACCATGCCATAATCCTAAAAAGACTTCCATCTACCGCAGGGCAAATCCTCGTAGCCATACTTCATCAGTTTCTGCTGAAAGAAATGGTGGTCTTTCTGTGGAAGATGATGATTTAACTTCTACAACAATATCTGAAACGGAGACTGACCAGAAATTCAGTTCAAGTTGCTCCAAGAGTATTACGCCTAACCAATGCAACAAACTCATTGACAGCGTACCGGTTGAAAAGGATTCGGAAGATCCATACAGCGATTTCAGGCATTCTATGCTTCAGATGATATTCGAGAAAGAGATTTTCACAGAGAAGGATCTTCAAGAGCTACTTAGCCGCTTCCTCGAGCTAAACTCACCATGTCATCACCAGATCATTATCAAGGCCTTCACTGAGATCTACCAACAGGTCTTTGCCAAGAGGGTGAAGAGTACTGCTCACCACCACTCATGA 537 0.4358 MSSNKKSLLKTLLTVNAGCGCGRPKLSDVKEPCHNPKKTSIYRRANPRSHTSSVSAERNGGLSVEDDDLTSTTISETETDQKFSSSCSKSITPNQCNKLIDSVPVEKDSEDPYSDFRHSMLQMIFEKEIFTEKDLQELLSRFLELNSPCHHQIIIKAFTEIYQQVFAKRVKSTAHHHS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01592 178 MobiDBLite consensus disorder prediction 32 87 - -
Pte1g01592 178 MobiDBLite consensus disorder prediction 45 87 - -
Pte1g01592 178 NCBIfam uncharacterized plant-specific domain TIGR01568 105 164 IPR006458 -
Pte1g01592 178 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Pte1g01592 178 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pte1g01592 178 Pfam Transcriptional repressor, ovate 109 165 IPR006458 -
Pte1g01592 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 166 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01592 Pte-Chr1 37597728 37598629 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte1g01592 Ovate 5.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01592 - - jre:108985199 183.726