Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01591 ATGTCGAGTACGCAGCCTCCTAACTCGTCCTATAGGCTCTCGGAGCAGATCACGCTTCCCATGAAGCGGCAGCTCCCCTTTTCTGCGATGAAGCCGCCGTCTGTATCTTCCGCTGATTATCACCGCTTCCAACTTGATAGTCGTCAAGGAGGTGATCAAGAGCCACAGAACACAGTAGTAAAATCTCCTCAAGTAAAGCAGAAGAATGGTGCAGCTGATTTTGAAGCTGATTCTGGGGATCGAGTAACTGTTCCTGGAGCCACGGAGTTATTAAACAGCCCCTTTCAGACACCTATCTCAGGAAAGGTTGGGAAGGGAAGTAAAAGTTCAAGGCTTACAAAATATAGTGGAACTGGAACTCAAACTCTATCTTCAAACAAGGGTTCTCCTTCAGGAAATAATCTCACTCCAGCTGGCCCGTGTCGTTATGATAGCTCCCTAGGTCTCTTGACAAAGAAGTTCATAAATTTGATCAAACAAGCAGAAGATGGTATATTGGATCTAAATAAAGCCGCTGATACATTAGAGGTGCAAAAAAGGAGGATATATGATATAACAAATGTATTGGAAGGAATCGGTCTCATAGAAAAGAAGCTCAAAAATAGAATCCAGTGGAAGGGACTCGATGTTGCTAGGCCAGGGGAGGCTGATGACAATTATCCTTTTTTACAGTCTGAAGTTGAAAAGCTTACCATGGAGGAACATGGATTAGATGAAAAAATAAGAGAAATGCAAGAAAGATTACGGGACCTCAGCGATGATGAGAACAATCAACAGTGGCTGTTTGTCACTGAAGAAGATATAAAGAGCTTGCGATGCTTCCAGAATGAAACATTAATAGCAATCAAAGCACCCCATGGCACTACACTGGAGGTCCCCGATCCTGATGAGACTGCAGACTATCCCCAGAGGAGGTACAGGATTGTTTTGAGAAGTACAATGGGCCCAATTGACATTTACCTTGTTAGTCAATTTGAGGAGAAATTTGAGGAGATTAATAATGTTGATTTGCCTCCCAACCATCCGCCAAGTTCAGAAGTTAATCATAATCTCACAACAGTTGTCAGGGAGGAACGAGTAACGGGCATAGAAATGCAGGGACAAGATGATCTTGGACCATGCACTGACTTGAATACATCACAAGATTTTATCAGTGGGATTATGAAGATTGTTCCATCGGACGTTGACAGTAATTCAGATTACTGGCTTTTATCAGATGCTGATGTTAGCATAACGGACATGTGGAGAACAGAACCTGGTGTTGGTTGGAATGAATTAGTGACGCTCGGTGAAGATTATTGCATGGCTGGTGTCCCAACCACAAGTGAAGTACCGTCTGCTGCTAAACCCACAAGGAGTTGA 1362 0.4339 MSSTQPPNSSYRLSEQITLPMKRQLPFSAMKPPSVSSADYHRFQLDSRQGGDQEPQNTVVKSPQVKQKNGAADFEADSGDRVTVPGATELLNSPFQTPISGKVGKGSKSSRLTKYSGTGTQTLSSNKGSPSGNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVARPGEADDNYPFLQSEVEKLTMEEHGLDEKIREMQERLRDLSDDENNQQWLFVTEEDIKSLRCFQNETLIAIKAPHGTTLEVPDPDETADYPQRRYRIVLRSTMGPIDIYLVSQFEEKFEEINNVDLPPNHPPSSEVNHNLTTVVREERVTGIEMQGQDDLGPCTDLNTSQDFISGIMKIVPSDVDSNSDYWLLSDADVSITDMWRTEPGVGWNELVTLGEDYCMAGVPTTSEVPSAAKPTRS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01591 453 MobiDBLite consensus disorder prediction 89 137 - -
Pte1g01591 453 MobiDBLite consensus disorder prediction 49 65 - -
Pte1g01591 453 Coils Coil 158 178 - -
Pte1g01591 453 Gene3D - 215 324 - -
Pte1g01591 453 SUPERFAMILY E2F-DP heterodimerization region 219 324 IPR037241 -
Pte1g01591 453 SMART E2F_TDP_2 142 207 IPR003316 GO:0005667|GO:0006355
Pte1g01591 453 MobiDBLite consensus disorder prediction 22 137 - -
Pte1g01591 453 Coils Coil 227 254 - -
Pte1g01591 453 Pfam E2F/DP family winged-helix DNA-binding domain 144 207 IPR003316 GO:0005667|GO:0006355
Pte1g01591 453 FunFam E2F transcription factor 1 136 209 - -
Pte1g01591 453 CDD E2F_DD 223 324 IPR032198 GO:0046983
Pte1g01591 453 PANTHER TRANSCRIPTION FACTOR E2F 85 417 IPR015633 GO:0000978|GO:0006357
Pte1g01591 453 SUPERFAMILY "Winged helix" DNA-binding domain 142 205 IPR036390 -
Pte1g01591 453 Gene3D - 136 209 IPR036388 -
Pte1g01591 453 Pfam E2F transcription factor CC-MB domain 223 323 IPR032198 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01591 Pte-Chr1 37592085 37597098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01591 22 434 E2F-DP Transcription Factor Family AT5G22220 55.378 1.34e-149 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Pte1g01591 E2F_CC-MB 3.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01591 K06620 - gmx:100819817 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01591 1 37592085 37597098 Pte1g01591 1 37592085 37597098 RCT