Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01587 GGTGTATATGCATCCTCGGATTTTAAGGAAGGAGAGCTTCTTTTGAAAGACCAAATGCTTGTTGGAATGCAACATTGTTCAAACAAGATGGACTGTTTGGTGTGTAGCTTCTGCTTTCGCTTCATTGGTTCAATAGAGCTTCAAATTGGGCGTAGGCTTTATTTGCAAGAATTAGGGGTTTCTCAGGATCATCATTGCTATGTAGAATCACTCATGAACGGTAATCTGAAATTGCCTCACTCTAGTGAGTTCTCATTGCCTCCCACAATTCCATGTTTTGGGAGATGTGGAGAAGCTTTCTATTGCAGCACATCATGTGCAGAGGCTGATTGGGAATCATCTCATTCTCTACTTTGTACTGGGGAGAGGTGCAGTTCAGTGCGTCAAAGAGCACTTCGGGAATTCATTCAACATGCTAATGAAACAAATGACATATTTCTCCTGGCTGCAAAGGCTATATCCTTCATTGTGTTAAAGTATCACAAGTTAAAAGCAGCTCTTCTTGAGGGTAAATGTAAAGATGTTGCTCCAAGCGTTCCAGATAATTGTGATTTATCCTTACTTTTAGAAGCTTGGAGACCATTCTCCATGGGACACAAAAGAAGGTGGTGGGACTGTATTGCATTACCAGAGGACGTTGATGTGTCCAATGAAGCTGCTTTCCGGATGCAAATAAAAGAGCTAGCTTTCCAGGTAGAACTCCTTTATGTGGACATCGATTTAGTCGTGGCTTCCCCCATTGAAGATTATTTTCTGTACATTGATGGTCTTCCTCATCCAACAAAGGAAGAAGCTGAGAGACTTACACGATCGATCCTAGATGCTCTTGGAGAAGATTATGCAGTTTGCTGCCAAGGCACTGCCTTTTTTCCTATCCAAAGCTGCATGAATCATTGTTGTCGCCCCAATGCCAGAGCATTCAAAAGAGAGGAGGACAGAGATGGCCAGGCGATAATCATTGCTTACCAATCCATCAGTAAAGGAGAAGAGGTGACCATCTCATATGTAGATGAGGACCTTCCAATTGAAGAGAGACAAGCTTCTCTTGCGGATTATGGTTTCCGGTGCCGATGTCCCAAATGCATTGAAGAAGAGCCA 1098 0.429 GVYASSDFKEGELLLKDQMLVGMQHCSNKMDCLVCSFCFRFIGSIELQIGRRLYLQELGVSQDHHCYVESLMNGNLKLPHSSEFSLPPTIPCFGRCGEAFYCSTSCAEADWESSHSLLCTGERCSSVRQRALREFIQHANETNDIFLLAAKAISFIVLKYHKLKAALLEGKCKDVAPSVPDNCDLSLLLEAWRPFSMGHKRRWWDCIALPEDVDVSNEAAFRMQIKELAFQVELLYVDIDLVVASPIEDYFLYIDGLPHPTKEEAERLTRSILDALGEDYAVCCQGTAFFPIQSCMNHCCRPNARAFKREEDRDGQAIIIAYQSISKGEEVTISYVDEDLPIEERQASLADYGFRCRCPKCIEEEP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01587 366 Gene3D SET domain 258 365 IPR046341 -
Pte1g01587 366 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 68 233 IPR044237 GO:0008168
Pte1g01587 366 SUPERFAMILY HIT/MYND zinc finger-like 90 120 - -
Pte1g01587 366 SUPERFAMILY SET domain 1 359 IPR046341 -
Pte1g01587 366 Gene3D - 64 121 - -
Pte1g01587 366 CDD SET_SMYD 284 361 - -
Pte1g01587 366 ProSiteProfiles SET domain profile. 1 336 IPR001214 GO:0005515
Pte1g01587 366 Pfam MYND finger 91 119 IPR002893 -
Pte1g01587 366 Pfam SET domain 1 335 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01587 Pte-Chr1 37549531 37554349 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte1g01587 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01587 - - cave:132180932 535.413