Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01586 ATGGAAACAGTTTGCTCAATTGACTCTCGTTGCGTCGATCAAATCTCTGCCCTACTTACTCGTCCTTCAACCTCTCAAGTCCAGGACTACTTCGATAAACTCTTACCAACCAGACAATGTCGTGGTATAAAAGTTCAACAAGACGTACAATCTGGCAAGGGTGTATATGCATCCTCGGATTTTAAGGAAGGAGAGCTTCTTTTGAAAGACCAAATGCTTGTTGGAATGCAACATTGTTCAAACAAGATGGACTGTTTGGTGTGTAGCTTCTGCTTTCGCTTCATTGGTTCAATAGAGCTTCAAATTGGGCGTAGGCTTTATTTGCAAGAATTAGGGGTTTCTCAGGATCATCATTGTAACATTCAAACAACGGAAGGTCATTCTGATACTGATTCATCAGATGGAGGGAACATTGCCCAAAGTTTTGGGGAATGTCCATCCGGTAGTTCCAAAACCAAAATTCCTCTTCCAGAAGGCTATGTAGAATCACTCATGCACGGTAATCTGAAATTGCCTCACTCTAGTGAGTTCTCATTGCCTCCCACAATTCCATGTTTTGGGAGATGTGGAGAAGCTTTCTATTGCAGCACATCATGTGCAGAGGCTGATTGGGAATCATCTCATTCTCTACTTTGTACTGGGGAGAGGTGCAGTTCAGTGCGTCAAAGAGCACTTCGGGAATTCATTCAACATGCTAATGAAACAAATGACATATTTCTCCTGGCTGCAAAGGCTATATCCTTCATTGTGTTAAAGTATCACAAGTTAAAAGCAGCTCTTCTTGAGGGTAAATGTAAAGATGTTGCTGCAAGCGTTCCAGATAATTGTGATTTATCCTTACTTTTAGAAGCTTGGAGACCATTCTCCATGGGACACAAAAGAAGGTGGTGGGACTGTATTGCATTACCAGAGGACGTTGATGTGTCCAATGAAGCTGCTTTCCGGATGCAAATAAAAGAGCTAGCTTTCCAGTCACTGCAGCTTCTGAAGGCAGCTATATTTGACTTGCAGTGTGAGCCTTTATTCTCCCTTGAGATTTTTGGGCATATTATTGGCATGTTCGAGCTGAATAATCTCGATTTAGTCGTGGCTTCCCCCATTGAAGATTATTTTCTGTACATTGATGGTCTTCCTCATCCAACAAAGGAAGAAGCTGAGAGACTTACACGATCGATCCTAGATGCTCTTGGAGAAGATTATGCAGTTTGCTGCCAAGGCACTGCCTTTTTTCCTATCCAAAGCTGCATGAATCATTGTTGTCGCCCCAATGCCAGAGCATTCAAAAGAGAGGAGGACAGAGATGGCCAGGCGATAATCATTGCTTACCAATCCATCAGTAAAGGAGAAGAGGTGACCATCTCATATGTAGATGAGGACCTTCCAATTGAAGAGAGACAAGCTTCTCTTGCGGATTATGGTTTCCGGTGCCGATGTCCCAAATGCATTGAAGAAGAGCCAAAACTACAAGGACAGTAA 1476 0.4282 METVCSIDSRCVDQISALLTRPSTSQVQDYFDKLLPTRQCRGIKVQQDVQSGKGVYASSDFKEGELLLKDQMLVGMQHCSNKMDCLVCSFCFRFIGSIELQIGRRLYLQELGVSQDHHCNIQTTEGHSDTDSSDGGNIAQSFGECPSGSSKTKIPLPEGYVESLMHGNLKLPHSSEFSLPPTIPCFGRCGEAFYCSTSCAEADWESSHSLLCTGERCSSVRQRALREFIQHANETNDIFLLAAKAISFIVLKYHKLKAALLEGKCKDVAASVPDNCDLSLLLEAWRPFSMGHKRRWWDCIALPEDVDVSNEAAFRMQIKELAFQSLQLLKAAIFDLQCEPLFSLEIFGHIIGMFELNNLDLVVASPIEDYFLYIDGLPHPTKEEAERLTRSILDALGEDYAVCCQGTAFFPIQSCMNHCCRPNARAFKREEDRDGQAIIIAYQSISKGEEVTISYVDEDLPIEERQASLADYGFRCRCPKCIEEEPKLQGQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01586 491 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 485 IPR044237 GO:0008168
Pte1g01586 491 CDD SET_SMYD 404 481 - -
Pte1g01586 491 Pfam SET domain 52 455 IPR001214 GO:0005515
Pte1g01586 491 Gene3D - 173 214 - -
Pte1g01586 491 Gene3D SET domain 379 486 IPR046341 -
Pte1g01586 491 ProSiteProfiles SET domain profile. 22 456 IPR001214 GO:0005515
Pte1g01586 491 SUPERFAMILY SET domain 37 481 IPR046341 -
Pte1g01586 491 Pfam MYND finger 184 212 IPR002893 -
Pte1g01586 491 SUPERFAMILY HIT/MYND zinc finger-like 184 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01586 Pte-Chr1 37460456 37465848 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte1g01586 SET 5.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01586 - - qsa:O6P43_028697 725.702