Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01572 ATGCCGAGAATGATAAACAAAAACAACAAGGAGACCTTGCAGAACTTTGACGCAGAGGCTGGAAGCAATAATAATGAGCCAAGCAAGAGGTTGAAGAAGGGGCCATGGACAGCAACAGAGGACGCAATTTTGATGGAATACGTGAAAAAACAGGGTGAAGGGAATTGGAATTCTATACAGAAGAATTCAGGGTTGGCTAGATGCGGTAAAAGCTGTAGGCTCAGATGGGCAAACCACCTTAGGCCGAATCTAAAGAAAGGTTCTTTCACTCCTGAGGAAGAAAGGATCATCATCGAGCTTCACGCTAAGCTTGGAAACAAATGGGCTCGCATGGCTGCACAGTTACCTGGACGAACAGACAATGAGATAAAGAATTATTGGAATACGAGGATGAAGAGGCGCCAACGAGCAGGATTACCAGTTTACCCTCATGACGTTCAACAAGAAGCAATTGCATACCAACTTCAACAGGAACAGCAGCAATGGCAAATCACTTCATCTGCATCATTTTCTTCAGCAATTTTCTCTGCATCTCAGCTAAGCAATCTCACTTACAACACCCCCGTCCAAGGCGGGGACCAATTAAGTTTTGCTTCTTTCTCGAACAATCTCCAAAATCCGACACGTTTCAATATGTACTCCCAGCAAAAAAATCAGTTCAAAGTTTTCAGCGAAAGCACGAACCATGGTGGTTTAGTCAAGAAGCCAGTGTCCCCTGTTTCTCCATATGACGAATCATCTTCTTCTACTGCTTTCAATCAGGGAACGTGTCAGTCCATTCCAAGTCACTCACATGATCACAATAGCAGTAGCGGCAACCCTTTTAGCTTGAGCTTCAGTGCAATGCTTATGGGGGTCGGACCTTATGAGACAGTTGGCGTGATGTCTGCCAAGGAAACAGAGGTCCCTTCAATCCAAACACCATCTTTGTCAGTAACCCCAACTTCATCCTACACCCATAGCGGTGAGGGCTTTGTTGCTGCTTCAGCCCATGCCTCCGATTATAAACTAGCCCCTGTGTTATCGTCGCAAGAGAACAATGGTTTGCTGGGAGATTTGGTGTTGCAGAGTCAAGGTCTCTCTGGCAGCTCCAGTTCTAGAAGTGATGATCAAAATTTATCTGAGAAAGGGAAGACTGTTGTAGCAGATGAGTCTCTTGAGGAAGAAGACGCTTTGATTCCCAAAGACAGTGAGACTCATCCTTCCGATTCACGAAGGGATGAAAACTTTTGCTCTCCTCCATCTTCAACTGAGAAGAAACCCGTAATGGATGATCCGTTGGGTGAGATGAATTCCATGGATGATGACTTGTTGTGCTTGCTGACTAACTTCCCCTCATGCATGCCATTGCCGGAGTGGTACAGAAGAGGTGAAGGACAAACATCCATGATAACGACTGATCAGAAGGTGCAACTTGAGAGTACTGATTCTGAGCATAATGCAAGCCCTGCCCCCAGCAAAGAACATACTTCTGCTCTTGCATCTTGA 1488 0.455 MPRMINKNNKETLQNFDAEAGSNNNEPSKRLKKGPWTATEDAILMEYVKKQGEGNWNSIQKNSGLARCGKSCRLRWANHLRPNLKKGSFTPEEERIIIELHAKLGNKWARMAAQLPGRTDNEIKNYWNTRMKRRQRAGLPVYPHDVQQEAIAYQLQQEQQQWQITSSASFSSAIFSASQLSNLTYNTPVQGGDQLSFASFSNNLQNPTRFNMYSQQKNQFKVFSESTNHGGLVKKPVSPVSPYDESSSSTAFNQGTCQSIPSHSHDHNSSSGNPFSLSFSAMLMGVGPYETVGVMSAKETEVPSIQTPSLSVTPTSSYTHSGEGFVAASAHASDYKLAPVLSSQENNGLLGDLVLQSQGLSGSSSSRSDDQNLSEKGKTVVADESLEEEDALIPKDSETHPSDSRRDENFCSPPSSTEKKPVMDDPLGEMNSMDDDLLCLLTNFPSCMPLPEWYRRGEGQTSMITTDQKVQLESTDSEHNASPAPSKEHTSALAS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01572 495 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 9 462 - -
Pte1g01572 495 FunFam MYB-related transcription factor 32 85 - -
Pte1g01572 495 MobiDBLite consensus disorder prediction 371 385 - -
Pte1g01572 495 MobiDBLite consensus disorder prediction 459 495 - -
Pte1g01572 495 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Pte1g01572 495 MobiDBLite consensus disorder prediction 358 430 - -
Pte1g01572 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 80 IPR017930 -
Pte1g01572 495 SMART sant 32 82 IPR001005 -
Pte1g01572 495 SMART sant 85 133 IPR001005 -
Pte1g01572 495 Gene3D - 32 85 - -
Pte1g01572 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Pte1g01572 495 MobiDBLite consensus disorder prediction 241 272 - -
Pte1g01572 495 MobiDBLite consensus disorder prediction 458 495 - -
Pte1g01572 495 Gene3D - 88 134 - -
Pte1g01572 495 CDD SANT 35 80 IPR001005 -
Pte1g01572 495 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Pte1g01572 495 CDD SANT 88 129 IPR001005 -
Pte1g01572 495 Pfam Myb-like DNA-binding domain 86 129 IPR001005 -
Pte1g01572 495 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Pte1g01572 495 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Pte1g01572 495 MobiDBLite consensus disorder prediction 392 407 - -
Pte1g01572 495 FunFam Transcription factor MYB97 88 165 - -
Pte1g01572 495 MobiDBLite consensus disorder prediction 1 35 - -
Pte1g01572 495 MobiDBLite consensus disorder prediction 231 272 - -
Pte1g01572 495 MobiDBLite consensus disorder prediction 7 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01572 Pte-Chr1 37313479 37316353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01572 29 151 MYB Transcription Factor Family AT2G32460 84.553 8.32e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte1g01572 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01572 K09422 - qsu:111998963 384.8