Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01570 ATGGGGACTGTGGTAAAGGGTGCTATTGCAGATGCTGTTTTGACTTCAATATGGGTGTTCAGTGTGTCAACGCTGAGACTCTTCAGTTCCAAAGTATCTGCAGCGCTTGGTGTTCCATCTGTGCCACTAGCAAGCTATTTCATCACAACAATTATCGTTACTCTTCTTGTATTCACTGTGAGCTTGATAGGTAAGGCACTAGGTGGTGCTAGCTTTAATCCGACATCTACTATTTCATTCTATGCAGCTGGTCTCAAGCCCAATGCCTCACTCACATCCATGGCGGTGAGCTTTCCGGCTCAGGCAGCGGGTGGAGTCCTTGGTGTGTTGGCAATTCTGAGTTTTATGCCAAATCAATACAAGCACATGCTTAAGGGACCATCTTTGAAAGTGGACTTGCATACAGGAGCTGTAGCTGAAGCGCTGTTGACTTTTGTATTTAACTTTTCTATACTCTATATTGTGATGAAAGGTCCCAGAAACCCATTGCTGCAACTTTACTTGATTTCCGTGTTAACGGTGTCATTGGTTATTCTAGGTTCTGGGTTCACAGGACCTTCTCTGAACCCTGCCAATGCATTTGGATGGGCATATGTAAACAGCAGGCACAATACATGGGAGCAATTCTATGTCTACTGGATATGTCCTTGTATTGGAGCAACTCTGGCTGCTAGGCTCTTCCGGTTTCTCTTTTACGCACCTGAGAAGGAGAAGAAAGCTTGA 723 0.4495 MGTVVKGAIADAVLTSIWVFSVSTLRLFSSKVSAALGVPSVPLASYFITTIIVTLLVFTVSLIGKALGGASFNPTSTISFYAAGLKPNASLTSMAVSFPAQAAGGVLGVLAILSFMPNQYKHMLKGPSLKVDLHTGAVAEALLTFVFNFSILYIVMKGPRNPLLQLYLISVLTVSLVILGSGFTGPSLNPANAFGWAYVNSRHNTWEQFYVYWICPCIGATLAARLFRFLFYAPEKEKKA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01570 240 SUPERFAMILY Aquaporin-like 5 235 IPR023271 -
Pte1g01570 240 Gene3D Glycerol uptake facilitator protein. 2 239 IPR023271 -
Pte1g01570 240 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g01570 240 PRINTS Major intrinsic protein family signature 210 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g01570 240 PRINTS Major intrinsic protein family signature 139 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g01570 240 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g01570 240 PRINTS Major intrinsic protein family signature 93 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g01570 240 PRINTS Major intrinsic protein family signature 170 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte1g01570 240 PANTHER AQUAPORIN SIP1-1 4 239 IPR044222 GO:0015250
Pte1g01570 240 Pfam Major intrinsic protein 5 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01570 Pte-Chr1 37301029 37302243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01570 1 231 Major Intrinsic Protein MIP AT3G04090 45.259 1.88e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01570 K09875 - qsa:O6P43_000566 323.553