Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01567 ATGGACTGGAGCAGAGGTCAAAACATCGGCCAGGGTTCATCAGCCACCGTTTCCCTCGCCACCATTTCCGGTAATGTCTGTGCTGTGAAGTCAGCTGAATTATGCCACTCATCGATGCTGCAAAGAGAGCAGAGGATTCTTTCTACTTTGAGTTCTCCCCATGTGATTGAATACAGAGGATGCGATGTCACTATGGAGAATAACAAGCTCTTGTACAATATTTTCATGGAATACATGCCACACGGCACTCTAACTGAAGCAATTAGCAGACATGGGGGTGGGCTTGAAGAGCCAATGATCGCTTTCTACACGAGACAAATTCTTCAGGGTCTTGAGTATCTACATTCAAATGGGATCGTACATTGTGATATTAAAGGTACTAATATTCTGATTGGTCAAGAGGGTGCTAAAATTTCAGATTTTGGATGTGCTAAATGGGTTGGCAACGCAGACAAGACTCAGCAGGTGGGGTCATCCATCGGAGGAACGCCAATGTATATGGCACCAGAGGTGGCGCGTGGAGAAAAACAGGGGTACCCTTGTGATATTTGGGCACTAGGGTGTACCTTAATCGAAATGGCGACTGGGTTATCACCTTGGACTAATGTGACAGACCCAGTTTCAGTTCTTTATCGTATAGCATATTCAGGGGAATCACCTGAAGTTCCAAACTTAATGTGTCATGAAGCAAAGGATTTCTTAAGGAAGTGTTTGAAGAGGAATCCAGTGGAGAGGTGGACGGCTGGTCAGCTTCTGAAGCATCCGTTTCTTGAGGAGCACAATGGGAATGAGAGCACTAAACAAATACAGGAATCTAATTCAAGTTCCCCAACAAGTATTCTTGATCAAGGCTTTTGGAATTCAGTAGTGGAATCAGAGACATCGTCAAGTCATATGATTTGTACAAGTTTTGAACATTCCCCTGCTGGGAGGATCAGAGAATTGGCTTTGGTTTCAGGGGAACCCAGTTTGACATGTCATGACGATTGGATCACTGTAAGAGAAGACAGATTAGAGGTTGAAGTTGGAGGAGACATGGTCTTACTGTCATAA 1053 0.4435 MDWSRGQNIGQGSSATVSLATISGNVCAVKSAELCHSSMLQREQRILSTLSSPHVIEYRGCDVTMENNKLLYNIFMEYMPHGTLTEAISRHGGGLEEPMIAFYTRQILQGLEYLHSNGIVHCDIKGTNILIGQEGAKISDFGCAKWVGNADKTQQVGSSIGGTPMYMAPEVARGEKQGYPCDIWALGCTLIEMATGLSPWTNVTDPVSVLYRIAYSGESPEVPNLMCHEAKDFLRKCLKRNPVERWTAGQLLKHPFLEEHNGNESTKQIQESNSSSPTSILDQGFWNSVVESETSSSHMICTSFEHSPAGRIRELALVSGEPSLTCHDDWITVREDRLEVEVGGDMVLLS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01567 350 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
Pte1g01567 350 CDD STKc_MAPKKK 2 257 - -
Pte1g01567 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pte1g01567 350 Pfam Protein kinase domain 5 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01567 350 Gene3D Transferase(Phosphotransferase) domain 1 2 315 - -
Pte1g01567 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 296 - -
Pte1g01567 350 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01567 350 MobiDBLite consensus disorder prediction 257 280 - -
Pte1g01567 350 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Pte1g01567 350 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01567 350 MobiDBLite consensus disorder prediction 266 280 - -
Pte1g01567 350 FunFam Mitogen-activated protein kinase kinase kinase 17 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01567 Pte-Chr1 37285144 37286989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01567 1 336 MAP Kinase Kinase Kinase AT1G05100 51.143 2.96e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte1g01567 Pkinase 1.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01567 K20716 - qsa:O6P43_000561 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01567 1 37285144 37286989 Pte9g01130 9 33046537 33047334 RCT
Pte1g01567 1 37285144 37286989 Pte2g00437 2 3397240 3398751 RCT
Pte1g01567 1 37285144 37286989 Pte1g01567 1 37285144 37286989 RCT