Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01551 ATGGACCGCGTGATCCTGAAGCTGCGATACCGGCTTCTTGCATGGCTTCACAGATCTCGCCCTCCTCCGATGTGTTTTGTGAGACGCTTTTCGTACAAGGAGATAAAAAAGGCCACGGATGGTTTTCACAGAATTGTCTATAGCAATTACCACAGTGCTGCATATAAGGCAATATTTCGAGATGGTGGAGTTTCTTTGGTGAAAGAAGTAAGAGAATTTGACCAAGGAAAGGACAGCTTCTACAGACAAGTTCAGCTATTGGAACGGTTGCATCACCGCCACCTTCTTACACTCAAGGGATTTTCTGCAGGACATAAAAGATTACTGGTTTTTGATCACGTGGAAAACGGCAGCTTGAAGGAGCATCTTAACGCAGATCCTCTCAGGACTCCATTGAATTGGAGGACAAGAATACAAATTGCAATGGGTGTTGTAGCCGCGCTGGAATATTTGTTTCTCTTTAATGAACCGCAGACGTATTACGCATCCGTCAACTCAAGCAGTATTATGTTAGATGAAAACTTCAATGCCAAACTATCAGATGTTGGTCTTCTTGGTCCTGGTGGGAAGTGTGTCAATATGCCTTATTCATCTTGTTCAGAAGATTGCGCGGGAATGGAATGCGGTAACTTGGTATTCCAGCTTGGGGTGTTGTTACTAGAGCTTGTCACTGGACAGTCATCAGAAGATTCTGATGTAATTGAATGGATACAAGGATCCCGCTTTCACAATTCCATGAATAACATGATAGACCCTGATCTAGGAAACAGTTTTGATTCGAGAGAGATCAAAACTCTCCTTGCAGTAGCGAAACTATGCATTAAATCTAAAAATAAGCCAACATTATCGATCCCTAAATTGTTTCATTATCTTCAGAAAGAAATAGATATTTAA 894 0.4172 MDRVILKLRYRLLAWLHRSRPPPMCFVRRFSYKEIKKATDGFHRIVYSNYHSAAYKAIFRDGGVSLVKEVREFDQGKDSFYRQVQLLERLHHRHLLTLKGFSAGHKRLLVFDHVENGSLKEHLNADPLRTPLNWRTRIQIAMGVVAALEYLFLFNEPQTYYASVNSSSIMLDENFNAKLSDVGLLGPGGKCVNMPYSSCSEDCAGMECGNLVFQLGVLLLELVTGQSSEDSDVIEWIQGSRFHNSMNNMIDPDLGNSFDSREIKTLLAVAKLCIKSKNKPTLSIPKLFHYLQKEIDI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01551 297 SMART tyrkin_6 32 267 IPR020635 GO:0004713|GO:0006468
Pte1g01551 297 Pfam Protein tyrosine and serine/threonine kinase 67 185 IPR001245 GO:0004672|GO:0006468
Pte1g01551 297 Gene3D Phosphorylase Kinase; domain 1 20 113 - -
Pte1g01551 297 PANTHER OS01G0253100 PROTEIN 27 293 - -
Pte1g01551 297 SUPERFAMILY Protein kinase-like (PK-like) 22 267 IPR011009 -
Pte1g01551 297 Gene3D Transferase(Phosphotransferase) domain 1 211 296 - -
Pte1g01551 297 ProSiteProfiles Protein kinase domain profile. 32 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01551 297 FunFam Protein kinase superfamily protein 16 112 - -
Pte1g01551 297 Gene3D Transferase(Phosphotransferase) domain 1 114 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01551 Pte-Chr1 37142962 37145714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01551 28 296 Receptor kinase-like Gene Family AT3G19300 34.028 3.15e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pte1g01551 PK_Tyr_Ser-Thr 4.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01551 - - tcc:18590189 398.667