Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01549 ATGTTTGGGAGGGCGCCTAAAAAGAGTGATAACACGAGGTACTGTGAGATATTAGAAGTAGCGAAGGACGCCAGTCCCGATGATCTAAAGGAGGCATATAAGAAAGCGGCTATAAATAACTATCCTGATCAGGGAGGCGACCGTGAGAAGGTGGAATCGGGATTTCCTAGATTGTCTATCCTCGAGGGGTCTAATTTTGTGTGTGGATATTTTAGTTTTGAGGGTTGGAATAAGTCTTACTGTCAAGATTATGTTATACCCCTTGATGAATCAAGTAACGGGAACATGGTAGTTTTAGTTCAAGCTTATGAGGTCTTGAGCGATCCTGAGAAACGTGAGATATATGACCAATATGGAGAAGATGCACTCAAGGTAGGAATGACTGGTGGAGCCGGTGGACACGACCAGATATCTCTCCAGCTTCTTCGGTGGAAGTCCAATTGGTGTAAAGGGTCCAAGTCTGGAGCTTCCATGAAGTGTTCTGGCTGTCAAGGAAGTGGTATGAAAGTTACAATCAGACAATAG 525 0.4419 MFGRAPKKSDNTRYCEILEVAKDASPDDLKEAYKKAAINNYPDQGGDREKVESGFPRLSILEGSNFVCGYFSFEGWNKSYCQDYVIPLDESSNGNMVVLVQAYEVLSDPEKREIYDQYGEDALKVGMTGGAGGHDQISLQLLRWKSNWCKGSKSGASMKCSGCQGSGMKVTIRQ* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01549 174 ProSiteProfiles dnaJ domain profile. 13 119 IPR001623 -
Pte1g01549 174 SUPERFAMILY Chaperone J-domain 8 51 IPR036869 -
Pte1g01549 174 Pfam DnaJ domain 15 56 IPR001623 -
Pte1g01549 174 CDD DnaJ 16 55 IPR001623 -
Pte1g01549 174 PRINTS DnaJ domain signature 111 130 IPR001623 -
Pte1g01549 174 PRINTS DnaJ domain signature 15 33 IPR001623 -
Pte1g01549 174 PRINTS DnaJ domain signature 33 48 IPR001623 -
Pte1g01549 174 PRINTS DnaJ domain signature 91 111 IPR001623 -
Pte1g01549 174 SMART dnaj_3 12 111 IPR001623 -
Pte1g01549 174 Gene3D DnaJ domain 3 130 IPR036869 -
Pte1g01549 174 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 132 IPR044713 GO:0006457|GO:0030544
Pte1g01549 174 SUPERFAMILY Chaperone J-domain 96 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01549 Pte-Chr1 37140635 37141794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01549 K09503 - thj:104800503 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01549 1 37140635 37141794 Pte17g00595 17 9189142 9190098 RCT
Pte1g01549 1 37140635 37141794 Pte1g01549 1 37140635 37141794 RCT