LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g01547	ATGGTCTCAGCAAAATGGATTAAAGCTTTGGTTAATTCAGTAAAATCAGATAAATCAGAATCATCTGAGAAGGATGGCAAGAGGACAACAGGTAACAAGTCTCGGCACCAGAGAAAGCATTCCGTTGAAATTGAAGGCAATAAGTTTCACCTTGAGTATTTAAATGATTCTGTCCCAACTACTGTGATCCCTCACACCCATTTGAATCCTGATGCCACTGATTCGTCTTTGACATCAAATCAAGTACACGATGTGTCTCACGACCATCAAATGATGAGGGAAGAATGGGCTGCAATATACATTCAGACAGCTTTTCGAGGATTCTTGGCTAGAAGAGCATTACGAGCTCTGAAAGGATTGGTAAGGCTTCAAGCTCTTGTAAGGGGTCATGCTGTGAGAAAGCAAGCAGCAATAACTCTGCGTTGCATGCAAGCTCTGGTGAGAGTTCAGGCTCGTGTACGGGCAAGGCGGGTTCGCTTGTCATTAGAAAGTCAAACTGAAAAGCAGAAACTTCAGCAACAGCTTGCAAATGAGGTTCGAGTTCGAGAAATAGAAGAAGGGTGGTGCGATAGTGTAGGATCTGTTGAAGAAATTCAAGCTAAATTGTTGAAGAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCAATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGTACAAGACAGGTGCCTGATCCCTCAGGATTTGAACCGGACAGAAGCAGCTGGGGTTGGAACTGGCTGGAAAGATGGATGGCCGTACGTCCTTGGGAGAATCGCTTTCTTGACATTAATCTGAGAGATGGTGTAAAGTTACATGAAAATGGTTTGGCCGAGAGCAAGACTGCCACTCGACCTCAGTTGAAGTATAGTAGCAAGAAAACATTGCCATCAAGTGTCCCCCAAAATCTTGCAAGCCAGAGGACGGGTCCAGCTAATCCTGATGGCTGTGATTCTTCACCTGGTAAGTCAGCAGGACTGACCGATCCATTTAACACACAGTTCCATAAGCCCAAGTCCAAGGCACATGGCGATGACTCTTTTGAGGAATCCAACTCACGGCCTGCGAATGGGTCGAGATCGCAGAGTAATCCAAAAGAGAGATTCACACAAGCAGATAAACAGGCCAAAAAACGTTTATCACTGCCTAACAATGGTACAGGACAAGGAATTCTGACAGCTAGAAATCGCAGAACCAATGTCAAAGGGGCACATGCCTCTGAGAAGTTTGTCAAAGATAGAACCAAGCTCAACGGAAGAGGAGATTCAAATCCTGCTGAATCTGTTCCACAGTCCACGGATCAGTAA	1311	0.4569	MVSAKWIKALVNSVKSDKSESSEKDGKRTTGNKSRHQRKHSVEIEGNKFHLEYLNDSVPTTVIPHTHLNPDATDSSLTSNQVHDVSHDHQMMREEWAAIYIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLSLESQTEKQKLQQQLANEVRVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAGTRQVPDPSGFEPDRSSWGWNWLERWMAVRPWENRFLDINLRDGVKLHENGLAESKTATRPQLKYSSKKTLPSSVPQNLASQRTGPANPDGCDSSPGKSAGLTDPFNTQFHKPKSKAHGDDSFEESNSRPANGSRSQSNPKERFTQADKQAKKRLSLPNNGTGQGILTARNRRTNVKGAHASEKFVKDRTKLNGRGDSNPAESVPQSTDQ*	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g01547	436	Pfam	IQ calmodulin-binding motif	96	115	IPR000048	GO:0005515
	Pte1g01547	436	FunFam	IQ-domain 11	93	144	-	-
	Pte1g01547	436	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	82	159	IPR027417	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	15	42	-	-
	Pte1g01547	436	Gene3D	-	95	136	-	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	337	351	-	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	17	42	-	-
	Pte1g01547	436	ProSiteProfiles	IQ motif profile.	118	145	IPR000048	GO:0005515
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	281	315	-	-
	Pte1g01547	436	PANTHER	IQ-DOMAIN 5-RELATED	1	389	-	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	278	436	-	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	352	370	-	-
	Pte1g01547	436	ProSiteProfiles	IQ motif profile.	94	122	IPR000048	GO:0005515
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	378	397	-	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	422	436	-	-
	Pte1g01547	436	MobiDBLite	consensus disorder prediction	402	421	-	-
	Pte1g01547	436	ProSiteProfiles	IQ motif profile.	143	170	IPR000048	GO:0005515
	Pte1g01547	436	SMART	iq_5	116	137	IPR000048	GO:0005515
	Pte1g01547	436	SMART	iq_5	93	115	IPR000048	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g01547	Pte-Chr1	37114563	37119162	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g01547	3	421	IQD Protein Family	AT3G22190	55.687	1.11e-122	361

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g01547	-		-	zju:107403946	530.406