Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01543 ATGATTGTGCATCTATTGAAAGGAAACCTGCCTCTGCTTAGAGTTGTTGTTCAAGGTCCTGGACCAGGTCCTCGATATGGACATGCAATGGCCTTGGTGGGTCAGAGATATCTAATGGTCATCGGTGGGAATGATGGGAAGAGGCCTCTTGCTGATGTATGGGCTTTGGACACAGCTGCCAAACCTTACGAATGGCGCAAGTTGGAACCTGAAGGAGAGGGTCCTCCCCCATGCATGTATGCAACTGCAAGTGCACGATCTGATGGCCTTCTTCTGCTTTGTGGAGGAAGGGATGCAAATGGTGTGCCACTTGCAAGTGCTTACGGGCTTGCAAAACATAGGGATGGTCGCTGGGAATGGGCAATTGCTCCTGGTGTGTCACCCTCTCCAAGATATCAACACGCAGCGGTCTTTGTTAATGCAAGACTCCATGTGTCTGGAGGGTCACTTGGTGGGGGGCATGTGGTAGAAGACTCATCAAGCGTGGCAGTGTTGGATACCGCTGCTGGTGTTTGGTGTGATACAAAATCTGTGGTTACTAGTCCACGGACTGGCCGATATAGCGCTGATGCTGCAGGTGGTGATGCTTCTGTGCAATTGACAAGGCGTTGCAGGCATGCAGCTGCTGCAGTTGGCGACTTAATCTTCGTTTACGGTGGTTTACGTGGTGGGGTTTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCAGCTGAGACAACTGCTGCCGCTTCACATGCTGCAGCAGCAGCTGCTTCTAGCATGCAAGCAAGCAGAAGATATGGTTTTGTTGATGAAAGGACAAGACAAACGATGCCTGAAGCAGCTCATGATGGTGCAGTCATCCTTGGAAATCCTGTTGCTCCTCCTATAAATGGTGACATGCATACTGACATCAGCACTGAAAATGCCATGGTGCAGGTATCCCGGAGATCTGCCAAAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAGGCGATTACTGCAACATTGGCTGCTGCCAAGGCACGGCAAGTTAATGGAGGAGTTGAACTACCAGATAGAGATGGTGGAGCTGAGGCAAGCCCTAGTGGCAAACCGATATCTTCCTCGATCAAACCTGATTCAGCAGGGGCTAACATTGTGGCTCCTGGAGTTCGCCTTCATCATAGAGCTGTGGTTGTTGCAGCAGAGACAGGTGGTGCTTTAGGTGGTATGGTTAGGCAACTTTCAATTGATCAATTTGAAAATGAAGGCAGGCGTGTCAGTTACGGAACTCCAGAGAATGCGACTGCAGCTAGAAAACTATTAGACAGGCAGATGTCGATTAATAGCGTACCAAAAAAGCTCATAGCACACCTACTCAAGCCTCGCGGATGGAAACCTCCTGTTCGACGTCAGTTTTTCTTGGACTGCAATGAAATTGCTGATCTTTGTGACAGTGCAGAGAGAATTTTTGCTAGTGAGCCAAGTGTCTTGCAGCTGAGAGCACCAATTAAGATATTTGGTGACCTACATGGGCAGTTTGGGGATCTTATGCGCCTTTTTGATGAGTATGGTGCACCATCTACTGCTGGGGATATAGCATATATCGATTACCTCTTCTTAGGAGATTATGTTGATCGAGGTCAACATAGCTTGGAAACAATAACGCTTCTGCTTGCTTTGAAGGTTGAGTATCCGAACAATGTACATTTAATACGGGGGAACCATGAAGCAGCAGATATCAATGCTCTGTTTGGCTTCCGAATTGAGTGCATAGAGAGACTGGGTGAGAGAGATGGAATTTGGGCTTGGCACCGGATAAATCGTTTATTTAATTGGCTACCTCTTGCAGCTCTCATTGAAAAGAAAATCATATGCATGCATGGTGGTATTGGTCGCTCAATAAATCATGTAGAACAAATAGAGAACATTCAGCGACCAATTACAATGGAGGCTGGTTCAATTGTGCTTATGGATCTATTGTGGTCTGACCCAACAGAAAATGACAGTGTTGAGGGATTGCGGCCAAATGCTAGAGGTCCAGGGTTAGTCACTTTTGGGCCGGACCGTGTGATGGAATTCTGTAATAACAATGATCTTCAGCTCATTGTGCGTGCACATGAATGTGTAATGGATGGCTTTGAACGCTTTGCTCAGGGACATCTGATCACACTTTTCTCTGCCACCAATTACTGCGGTACTGCAAATAATGCTGGGGCAATACTTGTTTTGGGTAGAGATCTTGTTGTGGTCCCCAAACTGATTCATCCGTTGCCACCTGCAATGACATCTCCAGAAACGTCACCAGAACACCATATCGAAGACACATGGATGCAGGAGCTAAATGCTAATAGGCCACCAACACCAACTAGAGGTCGTCCTCAAGTAGAAAACGACCGAGGTTCTCTTGCATGGATATAG 2397 0.4739 MIVHLLKGNLPLLRVVVQGPGPGPRYGHAMALVGQRYLMVIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANGVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGSLGGGHVVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVQLTRRCRHAAAAVGDLIFVYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAASSMQASRRYGFVDERTRQTMPEAAHDGAVILGNPVAPPINGDMHTDISTENAMVQVSRRSAKGVEYLVEASAAEAEAITATLAAAKARQVNGGVELPDRDGGAEASPSGKPISSSIKPDSAGANIVAPGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKLIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERLGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAMTSPETSPEHHIEDTWMQELNANRPPTPTRGRPQVENDRGSLAWI* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01543 798 Gene3D - 431 775 IPR029052 -
Pte1g01543 798 Pfam Galactose oxidase, central domain 37 85 - -
Pte1g01543 798 Pfam Calcineurin-like phosphoesterase 495 702 IPR004843 GO:0016787
Pte1g01543 798 PIRSF STPPP_BSU1 1 798 IPR012391 GO:0004721|GO:0009742
Pte1g01543 798 CDD MPP_Bsu1_C 447 749 IPR041758 -
Pte1g01543 798 FunFam Serine/threonine-protein phosphatase 113 256 - -
Pte1g01543 798 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 13 798 - -
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 495 522 IPR006186 GO:0016787
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 631 658 IPR006186 GO:0016787
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 601 627 IPR006186 GO:0016787
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 530 557 IPR006186 GO:0016787
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 713 729 IPR006186 GO:0016787
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 563 587 IPR006186 GO:0016787
Pte1g01543 798 PRINTS Serine/threonine phosphatase family signature 691 711 IPR006186 GO:0016787
Pte1g01543 798 Gene3D - 11 251 IPR015915 GO:0005515
Pte1g01543 798 MobiDBLite consensus disorder prediction 346 373 - -
Pte1g01543 798 SMART pp2a_7 467 751 IPR006186 GO:0016787
Pte1g01543 798 ProSitePatterns Serine/threonine specific protein phosphatases signature. 564 569 IPR006186 GO:0016787
Pte1g01543 798 MobiDBLite consensus disorder prediction 775 798 - -
Pte1g01543 798 SUPERFAMILY Kelch motif 19 233 IPR015915 GO:0005515
Pte1g01543 798 SUPERFAMILY Metallo-dependent phosphatases 452 759 IPR029052 -
Pte1g01543 798 FunFam Serine/threonine-protein phosphatase 431 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01543 Pte-Chr1 37082031 37088783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01543 459 694 Calmodulin-binding Proteins AT5G63870 29.044 1.05e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01543 - - tcc:18590198 1397.88